Organism : Clostridium acetobutylicum | Module List :
Regulation information for CAC2353(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for CAC2353
|Gene||Common Name||Description||Module membership|
|CAC0011||CAC0011||Uncharacterized conserved of ErfK family (NCBI ptt file)||113, 279|
|CAC0205||CAC0205||Predicted phosphohydrolases, Icc family (NCBI ptt file)||62, 279|
|CAC0262||CAC0262||Tryptophan-rich possible sensory protein, TSPO homolog (NCBI ptt file)||95, 279|
|CAC0354||CAC0354||Uncharacterized membrane protein (NCBI ptt file)||279, 312|
|CAC0601||CAC0601||Unchracterized membrane protein, possible permease (NCBI ptt file)||263, 330|
|CAC0604||CAC0604||Acyl carrier protein phosphodiesterase (NCBI ptt file)||57, 279|
|CAC0793||CAC0793||Uncharacterized conserved protein of probably eukaryotic origin (NCBI ptt file)||279, 314|
|CAC0857||CAC0857||Glucan phosphorylase (NCBI ptt file)||80, 330|
|CAC1093||CAC1093||Hypothetical secreted protein (NCBI ptt file)||39, 330|
|CAC1252||CAC1252||Possible membrane metalloendopeptidases (NCBI ptt file)||263, 330|
|CAC1276||SpoIIP||Stage II sporulation protein P (NCBI ptt file)||39, 330|
|CAC1298||CAC1298||Uncharacterized protein, related to B.subtilis spore coat protein COTS (NCBI ptt file)||203, 330|
|CAC1520||CAC1520||Hypothetical protein (NCBI ptt file)||118, 279|
|CAC1576||CAC1576||Predicted oxidoreductase, ortholog of GSP39 B.subtilis (NCBI ptt file)||188, 330|
|CAC1657||CAC1657||Uncharacterized conserved protein, yisX B.subtilis ortholog (NCBI ptt file)||279, 326|
|CAC1662||CAC1662||Hypothetical protein (NCBI ptt file)||142, 279|
|CAC1985||CAC1985||Hypothetical protein (NCBI ptt file)||279, 300|
|CAC2034||CAC2034||Hypothetical protein (NCBI ptt file)||38, 279|
|CAC2058||CAC2058||Predicted membrane protein (NCBI ptt file)||39, 330|
|CAC2089||CAC2089||Stage III sporulation protein AE, SpoIIIAE (NCBI ptt file)||263, 279|
|CAC2345||CAC2345||Glycosyltransferase (NCBI ptt file)||100, 279|
|CAC2352||CAC2352||Hypothetical protein (NCBI ptt file)||279, 330|
|CAC2353||CAC2353||Hypothetical protein (NCBI ptt file)||279, 330|
|CAC2354||CAC2354||Nifs family aminotransferase (NCBI ptt file)||41, 279|
|CAC2363||CAC2363||Uncharacterized protein, YtxC B.subtilis homolog (NCBI ptt file)||95, 279|
|CAC2412||CAC2412||Hypothetical protein (NCBI ptt file)||105, 279|
|CAC2426||CAC2426||Uncharacterized conserved protein (NCBI ptt file)||263, 330|
|CAC2427||CAC2427||Uncharacterized conserved protein (NCBI ptt file)||263, 330|
|CAC2428||CAC2428||Activator of 2-hydroxyglutaryl-CoA dehydratase (NCBI ptt file)||263, 330|
|CAC2459||CAC2459||2-oxoacid:ferredoxin oxidoreductase, alpha subunit (NCBI ptt file)||142, 279|
|CAC2569||CAC2569||NimC/NimA family protein (NCBI ptt file)||279, 320|
|CAC2666||CAC2666||Hypothetical protein (NCBI ptt file)||300, 330|
|CAC2679||CAC2679||Pullulanase (NCBI ptt file)||267, 279|
|CAC2686||CAC2686||Possible maltodextrin glucosidase (NCBI ptt file)||203, 330|
|CAC2794||CAC2794||Transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD) (NCBI ptt file)||300, 330|
|CAC2843||CAC2843||Protein containing aminopeptidase domain (iap family) (NCBI ptt file)||39, 279|
|CAC2863||CAC2863||Predicted membrane protein (NCBI ptt file)||102, 279|
|CAC2899||CAC2899||LysM repeats domain containing membrane protein (NCBI ptt file)||39, 330|
|CAC2903||CAC2903||LysM domain containing membrane protein (NCBI ptt file)||263, 330|
|CAC2941||CAC2941||HAD superfamily hydrolase (NCBI ptt file)||47, 279|
|CAC2945||CAC2945||Possible phosphoglycerate dehydrogenase (NCBI ptt file)||279, 363|
|CAC3031||hisC||Histidinol-phosphate aminotransferase (NCBI ptt file)||142, 279|
|CAC3204||CAC3204||Cell cycle protein MesJ ortholog, ATPase of the PP-loop superamily (NCBI ptt file)||142, 279|
|CAC3230||CAC3230||Hydrogenase subunit (ferredoxin) (NCBI ptt file)||174, 330|
|CAC3245||CAC3245||Subtilisin like protease (two fused domains) (NCBI ptt file)||118, 330|
|CAC3278||CAC3278||Uncharacterized protein, containing cell adhesion domain and ChW-repeats (NCBI ptt file)||263, 330|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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Identity of gene members in a module may help to identify potential interactions between different functional modules. Therefore, neighbor genes that share the same module(s) with gene under consideration are shown here. For each memebr, gene name, description and modules that contain it are listed.
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