GENES X12h X12m X18m X24h X24m X2m X30m X45m X48h X4h X4m X60m X8m Cre01.g018850.t1.2 -0.168394283888422 0.854988109674267 1.2976587842289 0 1.41337581736763 -0.402279679876767 1.38182672214636 2.44367470817964 -1.22716282345856 0.611194849474542 -0.335450716283343 0.329277754586551 -0.665856668725374 Cre01.g024500.t1.1 -0.905284101397859 0.169110555302311 0.580537388979664 -1.60663147909414 0.892560687026427 -1.6847488437748 0.807254335013873 1.02654851147878 -1.90899696861161 0.250160860594603 -1.19199527600452 0.472484441532642 -0.785575456088594 Cre01.g044550.t1.2 0.441052882630312 0.191841087162372 0.727965967828812 -0.694427297870928 0.520846371078196 -1.97744243752963 0 0.331891534884768 -1.19751820272731 -0.743965073523345 -0.875253877623977 1.27192116125424 -1.34050356258904 Cre02.g097800.t1.1 -0.130937818161718 0.735283094065433 1.18520350251616 -1.56276398275314 1.23856818024856 -1.28586685637221 1.27049479691368 0.524722497526571 -1.65843635025302 0.431394308436101 -1.11608877269248 0 -0.377937179464436 Cre02.g099750.t1.1 0.123632580345274 0.178294486342453 1.29001688670136 0 1.50816645458598 -1.53749119203131 0.468382703423816 1.3195445813689 -0.222265842439545 -0.0422965698382318 -1.53749119203131 0.908070442269186 -1.53749119203131 Cre02.g141550.t1.2 -0.822560289112726 0 0.699780348906141 0.0790215079460693 0.972487591652497 -1.05349496756842 0.471460108077626 1.55954246157688 -0.518412075973425 -0.959906805983187 -1.2181669960738 1.14769794125558 -0.838257548457508 Cre03.g144084.t1.1 2.39990430885172 -0.144063987223039 -0.386890836574161 0.0715940893366881 -0.0944592340541062 -0.310965354880813 0.0182209633445559 0.252247940502279 -0.975454954066068 -0.055242796032067 -0.137948538369081 0 0.102354652956069 Cre03.g145267.t1.1 -0.334778870132431 0.0770194164646507 0.924753088284391 0 1.26737405121227 -1.84207648705663 0.813478999261424 1.328664799251 -0.319950548063529 -0.689995017232365 -1.61173840235795 0.806174022145635 -1.20677889999991 Cre03.g180600.t1.1 -0.558394196352163 -0.311032201164427 0.447717289355634 -1.1038201244126 0.630742022501332 -2.38177046880688 0 0.974900270848673 -0.873153705363511 0.189588844395255 -1.47927272109942 0.859591004450097 -1.44877315795863 Cre03.g197750.t1.2 -0.392980883862227 0.591228173991783 0.407823108325197 0 0.397995807176242 -0.810319141753688 -0.412505322359266 0.579060480781364 -1.04760198383639 -0.453912712485458 0.014355275534338 1.93415599416892 -0.416380041999031 Cre04.g223300.t1.2 -0.0439666264418741 0.711487878281069 1.11317177608246 -1.55076956152 1.2765978120908 -1.27854441934856 0.932845756007984 0.739360350397584 -2.13147740928767 -0.245243174399165 -0.494824542925619 0.313431155968347 0 Cre05.g237050.t1.1 -0.878120637769288 0 0.597088022152742 -0.762460249894125 1.06878811845271 -0.689756461223579 0.727488973493058 1.32540870012915 -2.27718911944717 0.453360743541991 -0.744271517355542 1.15019543196859 -0.302799183035051 Cre05.g238311.t1.1 -0.81561960952693 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-0.0923749347939384 0.0215013696773009 -1.41792387873072 0.290459449621213 -1.36404254863338 0.0159783216833 1.44907931337279 -1.4573394015689 0.32637670118919 -0.826771857684994 1.57438855693634 -0.429773180826287 Cre06.g289500.t1.2 -0.692980799601373 0.453069434450752 1.29477033112759 -0.65416243144907 1.69055330256118 -1.10852964651933 1.24854095302697 0.99100745272973 -1.67229374307816 0 -0.768515407940063 0.304733258980127 -0.495086880855746 Cre06.g306200.t1.1 1.46651713779779 -0.290880776219964 0.12115127643164 -1.23479568449641 -0.979843258990442 -0.646942808378524 0.364185035228198 0.698917802127768 -1.19648423272754 0.600347151274194 -0.979843258990442 1.36594354012473 -0.979843258990442 Cre08.g359133.t1.1 -0.343923034117226 0 0.419033632205588 -0.998635031460595 1.09885730735825 -1.80897604868687 0.423718895962785 1.4145908428587 -1.67505981901012 0.147306135051264 -1.11871385470355 0.740976242268743 -0.929565865391734 Cre09.g414100.t1.2 0.568877712742193 0.0203825233270182 0.336964042774838 -1.59820555827126 0 -0.977221024710015 -0.378535942932658 1.3831844503677 -0.747792131804101 0.395481335142583 -0.171645086778258 2.01382437185797 -0.984952230850355 Cre10.g466500.t1.2 0.0449574332266162 0 1.10715582112159 -0.5240356939751 1.5812650253406 -1.55607255602467 0.628349710757184 0.901501976490818 -0.549165819911831 -0.748804414700159 -1.60606288114705 0.426625426888736 -1.3705237296435 Cre12.g505400.t1.2 0.281083710312191 0 0.778650522767341 -0.111565104389033 1.34596615309968 -0.961137653338583 0.568779210756385 1.69701683938811 -0.232994575133339 -1.43685671446304 -1.3460958367305 1.09550476404113 -1.06450063807899 Cre12.g540250.t1.2 -0.900441455785302 0.0656306542287344 0.452460654104169 0.107874033483881 0.54099328945533 -1.25322897768472 2.11618697765697 1.27051110108167 -1.2549329270072 0 -0.883619849705799 1.11466818793637 -0.744190997779162 Cre13.g568400.t1.2 0 0.39494708874376 1.14628528330374 -0.771367552435695 1.58169168748119 -1.03416362297079 1.29077650534707 1.59058457970522 -1.02553032244736 -0.187622384008586 -0.770616238390872 1.34319040063953 -0.395440117143952 Cre14.g634100.t1.1 -0.969254134464092 1.00468017305804 0.978095257768591 -0.472102290565719 1.43955603151421 -0.628843700402947 0.51331807322706 1.53207653548628 -1.44838441365424 0 -0.766183534016865 1.02841711250263 0.09175341995768 Cre16.g683931.t1.1 -0.90975816220181 0 0.939350273478823 -0.452731450754607 1.0676900099444 -1.14851665547211 0.427323210746243 1.06295054670471 -2.4716454851614 -0.24740380709028 -1.06764067180056 0.922919807205565 -0.517371981026847 Cre17.g721500.t1.2 0.332141767082342 0 0.834436497002297 -0.528822507550622 1.15799833010615 -1.57874808489448 0.651092173424348 1.49421925092598 -1.78961031451118 -0.590658193536202 -1.27274912638405 0.432418762868221 -0.769452916252451 Cre17.g735950.t1.2 -0.0539708779890012 -0.0286203449449974 0.798969493616428 -0.356199717156519 1.25941877838118 -1.25195181390283 0.158574431521368 1.7463021606187 -1.25195181390283 0 -1.25195181390283 1.4089200405272 -1.25195181390283

POSITION A C G T 1 0.066667 0.9 0.033333 0 2 0.7 0.1 0 0.2 3 0 0 0.866667 0.133333 4 0 0.833333 0.066667 0.1 5 0.733333 0 0.033333 0.233333 6 0.133333 0.7 0.133333 0.033333 7 0.033333 0.866667 0.1 0 8 0.766667 0.033333 0.066667 0.133333 9 0.066667 0.033333 0.566667 0.333333 10 0 0.8 0.2 0 11 0.5 0.1 0.266667 0.133333 12 0.1 0.233333 0.566667 0.1 13 0.1 0.866667 0 0.033333 14 0.8 0.066667 0.133333 0 15 0 0.4 0.566667 0.033333 16 0 0.633333 0.233333 0.133333 17 0.4 0.266667 0 0.333333 18 0.166667 0.1 0.633333 0.1 19 0.166667 0.8 0.033333 0 20 0.9 0.066667 0 0.033333 21 0 0.5 0.5 0

POSITION A C G T 1 0.172414 0.310345 0.103448 0.413793 2 0 0 1 0 3 0 0 1 0 4 0 0.586207 0 0.413793 5 0.37931 0 0.413793 0.206897 6 0 0 1 0 7 0.034483 0 0.344828 0.62069 8 0.206897 0 0.793103 0 9 0.103448 0 0.862069 0.034483 10 0.034483 0.482759 0 0.482759 11 0 0.034483 0.965517 0 12 0 0.068966 0.896552 0.034483 13 0 0.931034 0 0.068966 14 0.448276 0 0.206897 0.344828 15 0 0 0.793103 0.206897