Module 29 Residual: 0.41
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.41 78 6 20160204
Motif 1
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
stphcy5plogcy3slide487norm
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.3
stphcy3plogcy5slide581norm
Plogcy5plogcy3slide113norm
dcpA.knockout.rep2
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X4dbfcy5plogcy3slide901norm
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
dosR.WT_Replicate3
Slow.vs..Fast.Replicate.1
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.with.vs..without.N_rep2
Biological.replicate.1.of.7..panaxydol.treatment
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
WT.vs..DglnR.N_starvation_dye.swap_rep1
Bedaquiline.vs..DMSO.120min
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