Module 37 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.48 73 7 20160204
Motif 1
MSMEG_1843 Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) MSMEG_6270 Uncharacterized protein
MSMEG_6272 NAD-dependent glutamate dehydrogenase Gdh (EC 1.4.1.2) (NAD-glutamate dehydrogenase)
Wild.type.rep2.x
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
X4XR.rep1
Bedaquiline.vs..DMSO.15min
dosR.WT_Replicate4
Bedaquiline.vs..DMSO.30min
Plogcy5plogcy3slide113norm
dosR.WT_Replicate2
Biological.replicate.4.of.6..kanamycin.treatment
Plogcy5plogcy3slide110norm
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.1.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT_log.phase_rep1
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X4dbfcy5plogcy3slide480norm
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Wild.type.rep3
Bedaquiline.vs..DMSO.120min
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