Module 51 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.57 0.000000044 29000 75 24 20160204
Motif 1
e-value: 0.000000044
e-value: 29000
MSMEG_4606 Uncharacterized protein MSMEG_1082 Putative response regulator
MSMEG_5551 Stas domain protein MSMEG_3308 Universal stress protein UspA (Universal stress protein family protein, putative)
MSMEG_5447 Dolichyl-phosphate-mannose--protein O-mannosyl transferase (Dolichyl-phosphate-mannose-protein mannosyltransferase) MSMEG_5742 Acyltransferase domain protein
MSMEG_1629 Uncharacterized protein MSMEG_5743 Patatin
MSMEG_2126 Uncharacterized protein MSMEG_0910 Uncharacterized protein
MSMEG_1805 Uncharacterized protein MSMEG_3367 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100)
MSMEG_5817 Uncharacterized protein MSMEG_0912 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) (3-hydroxybutyryl-CoA dehydrogenase FadB2) (EC 1.1.1.-)
MSMEG_1684 Uncharacterized protein MSMEG_1566 Oxidoreductase
MSMEG_5818 MCE-family protein MCE1a (Virulence factor Mce family protein) MSMEG_2076 GrpB domain protein (Uncharacterized protein)
MSMEG_1263 Uncharacterized protein MSMEG_3608 Acetyl-CoA acetyltransferase
MSMEG_3619 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) MSMEG_4318 Uncharacterized protein
MSMEG_3597 Uncharacterized protein MSMEG_3832 4-hydroxyacetophenone monooxygenase (Cyclohexanone monooxygenase) (EC 1.14.13.22)
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Bedaquiline.vs..DMSO.15min
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep3
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.2.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide480norm
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.2.of.6..negative.control
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