Module 67 Residual: 0.44
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.44 3e-24 0.00000000019 87 24 20160204
Motif 1
e-value: 3e-24
e-value: 0.00000000019
MSMEG_2218 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17) (Enoyl-CoA hydratase/isomerase family protein) MSMEG_2255 Carboxyl transferase domain protein (Propionyl-CoA carboxylase) (EC 6.4.1.3)
MSMEG_2237 Anaerobic dehydrogenase, typically MSMEG_2257 Cytochrome P450 (Cytochrome P450-terp) (EC 1.14.-.-)
MSMEG_2236 Putative thiolase (Thiolase) (EC 2.3.1.176) MSMEG_2256 Putative oxidoreductase/luciferase-like protein (EC 1.5.99.11) (Uncharacterized protein)
MSMEG_2234 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase, middle domain protein) MSMEG_2219 Enoyl-CoA hydratase/isomerase (Enoyl-CoA hydratase/isomerase family protein)
MSMEG_2233 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase, C-domain protein) MSMEG_2220 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17)
MSMEG_4818 Cytochrome P450 (Putative cytochrome P450 123) (EC 1.14.-.-) MSMEG_2221 Uncharacterized protein
MSMEG_2231 AMP-binding enzyme (Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase) (EC 2.3.1.86) MSMEG_2222 Uncharacterized protein
MSMEG_2230 Amidohydrolase 2 (Amidohydrolase family protein) MSMEG_2223 Enoyl-CoA hydratase/isomerase family protein
MSMEG_2215 AMP-binding enzyme (AMP-dependent synthetase and ligase) MSMEG_2224 Acetyl-CoA C-acyltransferase
MSMEG_2217 AMP-dependent synthetase and ligase (EC 6.2.1.26) MSMEG_2229 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17)
MSMEG_2216 AMP-binding enzyme MSMEG_4819 Conserved domain protein (Uncharacterized protein)
MSMEG_2238 Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase (NAD) family protein) (EC 1.2.1.-) MSMEG_2232 Amidohydrolase 2 (Amidohydrolase family protein)
KO_stationary.phase_rep1
Wild.type.rep2.x
dcpA.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
stphcy5plogcy3slide580norm
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate3
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
rel.knockout.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
X2XR.rep1
X2XR.rep2
Sub.MIC.INH
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.3.of.6..isoniazid.treatment
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
WT.with.vs..without.N_rep1
KO_log.phase_rep1
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep2
X4XR.rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.2
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..kanamycin.treatment
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