Module 80 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.51 3.4e-22 0.0000000000091 88 17 20160204
Motif 1
e-value: 3.4e-22
e-value: 0.0000000000091
MSMEG_1369 LacI-family protein transcriptional regulator (LacI-family transcriptional regulator) (EC 5.1.1.1) MSMEG_1370 2-deoxy-scyllo-inosamine dehydrogenase (EC 1.1.1.-)
MSMEG_6679 Metallo-beta-lactamase family protein MSMEG_0165 Protein FdhD homolog
MSMEG_4658 Sugar ABC transporter substrate-binding protein MSMEG_0164 Transmembrane transport protein
MSMEG_4659 GntR-family protein transcriptional regulator (GntR-family transcriptional regulator) MSMEG_4656 Sugar ABC transporter ATP-binding protein (EC 3.6.3.17)
MSMEG_6677 LysR family regulatory protein (Transcriptional regulator, LysR family protein) MSMEG_4661 Sugar kinase, ribokinase family protein
MSMEG_1374 Ribose ABC transporter, periplasmic binding protein MSMEG_4657 ABC transporter membrane protein (ABC transporter sugar permease)
MSMEG_1373 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components MSMEG_1283 Antitoxin VapB
MSMEG_1372 ABC transporter ATP-binding protein (Sugar ABC transporter, ATP binding protein) (EC 3.6.3.-) MSMEG_1284 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Endoribonuclease VapC) (Toxin VapC)
MSMEG_1371 Phosphomannose isomerase-like protein (EC 5.3.1.8) (Uncharacterized protein)
KO_stationary.phase_rep1
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..falcarinol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.120min
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
WT.with.vs..without.N_dye.swap_rep2
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Biological.replicate.3.of.6..isoniazid.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
Biological.replicate.2.of.6..isoniazid.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Bedaquiline.vs..DMSO.30min
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep1.x
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.5
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.2.of.6..kanamycin.treatment
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