Module 112 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 0.0000000000000022 | 0.00000000033 | 75 | 35 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000022 | |
| Motif 2 |
 |
| e-value: 0.00000000033 |
| MSMEG_3316 Major facilitator superfamily MFS-1 (Transporter, major facilitator family protein) | MSMEG_6385 NAD-dependent decaprenylphosphoryl-D-2-keto erythropentose reductase (EC 1.1.1.333) (Decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase) (Decaprenylphosphoryl-beta-D-ribofuranose 2'-epimerase 2) (DprE2) |
| MSMEG_3077 Uncharacterized protein | MSMEG_6601 Uncharacterized protein |
| MSMEG_0479 Uncharacterized protein | MSMEG_4723 Uncharacterized protein |
| MSMEG_4055 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) | MSMEG_4410 Uncharacterized protein |
| MSMEG_3428 Uncharacterized protein | MSMEG_0283 3-oxoacyl-[acyl-carrier-protein] reductase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_2633 ABC transporter ATP-binding protein (ABC-type transporter, ATP-binding protein) (EC 3.6.3.36) | MSMEG_4417 Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) |
| MSMEG_5977 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) | MSMEG_4724 Oligoribonuclease (EC 3.1.-.-) |
| MSMEG_1332 Uncharacterized protein | MSMEG_4418 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) |
| MSMEG_3946 Probable conserved transmembrane protein | MSMEG_0544 LysR family transcriptional regulator (Transcriptional regulator) |
| MSMEG_2636 LacI-type transcriptional regulator (Regulatory protein, LacI) | MSMEG_0638 Conserved hypothetical proline and threonine rich protein |
| MSMEG_2635 ABC transporter permease protein (Binding-protein-dependent transport systems inner membrane component) | MSMEG_2246 Uncharacterized protein |
| MSMEG_2634 Uncharacterized protein | MSMEG_2247 Dihydrokaempferol 4-reductase (NAD-dependent epimerase/dehydratase) (EC 1.1.1.219) |
| MSMEG_2736 GTPase HflX (GTP-binding protein HflX) | MSMEG_0637 FAD dependent oxidoreductase (Iron-sulfur binding oxidoreductase) |
| MSMEG_2474 Cutinase (EC 3.1.1.74) | MSMEG_2765 Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23) (dUTP pyrophosphatase) |
| MSMEG_3948 Diacylglycerol O-acyltransferase (EC 2.3.1.20) | MSMEG_2764 Conserved alanine rich transmembrane protein (Probable conserved alanine rich transmembrane protein) |
| MSMEG_2198 ThiF family protein (UBA/THIF-type NAD/FAD binding fold protein) | MSMEG_2766 Uncharacterized protein |
| MSMEG_6387 Integral membrane indolylacetylinositol arabinosyltransferase EmbC (EC 2.4.2.34) (Probable arabinosyltransferase A) (EC 2.4.2.-) | MSMEG_1216 ABC-type transport system periplasmic substrate-binding protein |
| MSMEG_6386 Arabinofuranosyltransferase AftA (EC 2.4.2.-) |
Wild.type.rep2.x
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..falcarinol.treatment
Wild.type.rep3
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
Wild.type.rep2.y
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.4.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
dcpA.knockout.rep2
Sub.MIC.INH
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.120min
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