Module 119 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.54 1.5e-17 0.0000039 76 29 20160204
Motif 1
e-value: 1.5e-17
e-value: 0.0000039
MSMEG_2952 Major facilitator superfamily MFS_1 (Transport protein) MSMEG_4367 Formamidase (EC 3.5.1.49)
MSMEG_2831 Uncharacterized protein MSMEG_3949 Uncharacterized protein
MSMEG_6053 Cob(II)yrinic acid a,c-diamide reductase (EC 1.16.8.1) MSMEG_6255 Uncharacterized protein
MSMEG_5408 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) MSMEG_6665 Integral membrane protein (Uncharacterized protein)
MSMEG_3548 ABC amino acid transporter, permease component (Ectoine/hydroxyectoine ABC transporter, permease protein EhuC) MSMEG_3517 HAD-superfamily protein subfamily protein IB hydrolase
MSMEG_3549 ABC amino acid transporter, permease component (Ectoine/hydroxyectoine ABC transporter, permease protein EhuD) MSMEG_6767 Mycocerosic acid synthase (EC 2.3.1.111)
MSMEG_5361 Uncharacterized protein MSMEG_0705 Major facilitator superfamily MFS_1 (Putative permease of the major facilitator superfamily protein)
MSMEG_1368 DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta') MSMEG_3550 ABC amino acid transporter, ATPase component (EC 3.6.3.21) (Ectoine/hydroxyectoine ABC transporter, ATP-binding protein)
MSMEG_6256 Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC 1.2.1.11) (Aspartate-beta-semialdehyde dehydrogenase) MSMEG_1811 Maf-like protein MSMEG_1811/MSMEI_1767
MSMEG_3986 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Putative acetate--CoA ligase) MSMEG_3518 Glyoxalase family protein (Uncharacterized protein)
MSMEG_0215 Pirin-like protein (YhhW family protein) MSMEG_5806 Uncharacterized protein
MSMEG_6258 Nitroreductase family protein MSMEG_0757 Uncharacterized protein
MSMEG_1367 DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta) MSMEG_3547 Ectoine/hydroxyectoine ABC transporter solute-binding protein
MSMEG_1089 Uncharacterized protein MSMEG_2476 MarR family protein transcriptional regulatory protein (Transcriptional regulator, MarR family)
MSMEG_4369 Uncharacterized protein
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
KO_log.phase_rep1
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Wild.type.rep2.y
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Plogcy5plogcy3slide113norm
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
Biological.replicate.4.of.7..ethambutol.treatment
stphcy3plogcy5slide581norm
X2.5..vs..50..air.saturation.Replicate.2
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
dosR.WT_Replicate2
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.4.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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