Module 122 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.0000000000012 | 0.000055 | 77 | 35 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000012 | |
| Motif 2 |
 |
| e-value: 0.000055 |
| MSMEG_5776 Phosphate-specific transport system accessory protein PhoU | MSMEG_0270 Aminoglycoside phosphotransferase (EC 2.7.1.39) |
| MSMEG_0777 F420-dependent glucose-6-phosphate dehydrogenase (FGD) (G6PD) (EC 1.1.98.2) | MSMEG_1208 Glycosyltransferase, group I |
| MSMEG_2972 Permease, cytosine/purines, uracil, thiamine, allantoin family protein | MSMEG_4141 Uncharacterized protein |
| MSMEG_6440 FAD-containing monooxygenase EthA (EC 1.14.13.-) (Baeyer-Villiger monooxygenase) (BVMO) (Prodrug activator EtaA) | MSMEG_3106 Quinone oxidoreductase (EC 1.6.5.5) |
| MSMEG_6441 HTH-type transcriptional regulator EthR | MSMEG_1192 M23 peptidase domain protein |
| MSMEG_4292 Conserved integral membrane protein (Integral membrane protein) | MSMEG_1429 Cytochrome P450-terp (EC 1.14.-.-) |
| MSMEG_6771 Uncharacterized protein | MSMEG_0918 Transcriptional regulator, XRE family (Transcriptional regulator, XRE family protein) |
| MSMEG_2128 Lysine N-acyltransferase mbtK (Malonyl CoA decarboxylase) | MSMEG_6686 Acyl CoA dehydrogenase (Glutaryl-CoA dehydrogenase) (EC 1.3.8.6) |
| MSMEG_1627 Uncharacterized protein | MSMEG_6687 Aldehyde dehydrogenase (EC 1.2.1.-) (Aldehyde dehydrogenase, thermostable) (EC 1.2.1.3) |
| MSMEG_0411 Acyl-CoA synthase (FadD28) | MSMEG_6685 4-aminobutyrate aminotransferase (4-aminobutyrate transaminase) (EC 2.6.1.19) |
| MSMEG_3982 Acyl-CoA dehydrogenase (EC 1.3.99.-) | MSMEG_1119 Glutamine amidotransferase, class I (Peptidase C26) (EC 4.1.3.27) |
| MSMEG_3981 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) | MSMEG_6362 Quinone oxidoreductase (EC 1.6.5.5) |
| MSMEG_0187 Acetyltransferase | MSMEG_0775 Beta-lactamase-like protein (Metallo-beta-lactamase superfamily protein) |
| MSMEG_0213 Transcriptional regulator | MSMEG_0089 Chromosome condensation protein (Pirin-like protein) |
| MSMEG_0212 Glyoxalase/bleomycin resistance protein/dioxygenase (Lyase) | MSMEG_6689 CAIB/BAIF family protein (L-carnitine dehydratase/bile acid-inducible protein F) (EC 2.8.3.16) |
| MSMEG_0211 ABC transporter, ATP-binding protein (UvrA-like ABC transporter) | MSMEG_4121 GntR family transcriptional regulator (GntR-family protein transcriptional regulator) |
| MSMEG_1207 Glycosyl transferase group 1 (Glycosyltransferase, group I) | MSMEG_4097 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase domain protein) |
| MSMEG_3497 Transcriptional regulator, ArsR family protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
X4XR.rep1
Bedaquiline.vs..DMSO.30min
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.5.of.7..falcarinol.treatment
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
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