Module 157 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 3.1e-19 | 0.12 | 79 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.1e-19 | |
| Motif 2 |
 |
| e-value: 0.12 |
| MSMEG_3177 Probable transcriptional regulatory protein, putative (Transcriptional regulator, TetR family) | MSMEG_4475 LppP protein |
| MSMEG_5538 Succinate semialdehyde dehydrogenase (EC 1.2.1.16) ([NADP+] succinate-semialdehyde dehydrogenase) | MSMEG_4570 Uncharacterized protein |
| MSMEG_4567 Transglutaminase-like protein (Uncharacterized protein) | MSMEG_4027 Zinc-containing alcohol dehydrogenase superfamily protein |
| MSMEG_5838 TetR family transcriptional regulator (TetR-family protein transcriptional regulator) | MSMEG_5314 Uncharacterized protein |
| MSMEG_0680 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) | MSMEG_5541 Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) |
| MSMEG_4040 Nitroreductase | MSMEG_5270 Cystathionine beta-synthase (EC 4.2.1.22) |
| MSMEG_4568 Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z) | MSMEG_2408 Uncharacterized oxidoreductase MSMEG_2408/MSMEI_2347 (EC 1.-.-.-) |
| MSMEG_3014 Uncharacterized protein | MSMEG_2409 Alpha/beta hydrolase fold family protein |
| MSMEG_4482 DNA primase (EC 2.7.7.-) | MSMEG_4124 Uncharacterized protein |
| MSMEG_6213 Catalase (EC 1.11.1.6) (Manganese containing catalase) | MSMEG_5840 DoxX family protein (Uncharacterized protein) |
| MSMEG_2411 Conserved integral membrane protein | MSMEG_2407 Uncharacterized oxidoreductase MSMEG_2407/MSMEI_2346 (EC 1.-.-.-) |
| MSMEG_2410 Putative conserved membrane protein (Putative serine-threonine protein kinase) | MSMEG_3937 Conserved hypothetical membrane protein (Uncharacterized protein) |
| MSMEG_3490 Putative membrane acyltransferase | MSMEG_0106 Sensor kinase, two-component system (Sensory histidine kinase) |
| MSMEG_4361 Uncharacterized protein | MSMEG_0105 DNA-binding response regulator, LuxR family protein (Putative nitrate/nitrite response transcriptional regulatory protein Narl) |
| MSMEG_4399 Uncharacterized protein | MSMEG_1450 Uncharacterized protein |
| MSMEG_3936 Universal stress protein family protein | MSMEG_4902 Beta-lactamase-like protein (EC 3.1.6.1) (Metal-dependent hydrolase of the beta-lactamase superfamily protein III) |
| MSMEG_4476 Uncharacterized protein |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.2.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
dosR.WT_Replicate2
Biological.replicate.5.of.7..falcarinol.treatment
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