Module 185 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.59 | 3.8e-23 | 0.000000021 | 83 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.8e-23 | |
| Motif 2 |
 |
| e-value: 0.000000021 |
| MSMEG_5101 Uncharacterized protein | MSMEG_5058 ABC transporter, ATP-binding protein SugC (Sugar-transport ATP-binding protein ABC transporter sugC) (EC 3.6.3.25) |
| MSMEG_1188 Uncharacterized protein | MSMEG_5059 ABC transporter, permease protein SugB (Sugar-transport integral membrane protein ABC transporter SugB) |
| MSMEG_1189 Uncharacterized protein | MSMEG_5234 Short-chain dehydrogenase/reductase SDR |
| MSMEG_5642 Acetyl-coenzyme a carboxylase carboxyl transferase (Putative carboxyltransferase subunit of acetyl-CoA carboxylase) (EC 6.4.1.2) | MSMEG_5235 Short chain dehydrogenase family protein (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_2431 Amidohydrolase (Amidohydrolase 3) | MSMEG_5233 NAD-dependent epimerase/dehydratase (EC 5.1.3.2) (RmlD substrate binding domain superfamily protein) |
| MSMEG_2430 Signal recognition particle protein (Fifty-four homolog) | MSMEG_5098 Uncharacterized protein |
| MSMEG_4636 Uncharacterized protein | MSMEG_5099 Uncharacterized protein |
| MSMEG_5057 Conserved hypothetical membrane protein (Uncharacterized protein) | MSMEG_5063 Integral membrane protein (Uncharacterized protein) |
| MSMEG_5641 Glycosyl transferase, group 1 family protein | MSMEG_5062 Uncharacterized protein |
| MSMEG_5640 Amylo-alpha-1,6-glucosidase | MSMEG_5061 Bacterial extracellular solute-binding protein |
| MSMEG_4635 Ammonium transporter family protein (EC 2.3.3.9) | MSMEG_5060 ABC sugar transporter, permease component (ABC transporter, permease protein SugA) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
X4XR.rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Wild.type.rep1.x
KO_log.phase_rep2
KO_log.phase_rep1
dosR.WT_Replicate4
X3dbfcy5plogcy3slide601norm
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.7.of.7..falcarinol.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.5.of.6..negative.control
Biological.replicate.4.of.7..panaxydol.treatment
X4dbfcy5plogcy3slide480norm
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Biological.replicate.1.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Comments
Log in to post comments