Module 186 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.53 0.0000000000052 14 79 23 20160204
Motif 1
e-value: 0.0000000000052
e-value: 14
MSMEG_6844 Trap-t family protein transporter, dctp MSMEG_0939 Ppx/GppA phosphatase family protein
MSMEG_6845 TRAP dicarboxylate transporter, DctM subunit (Trap dicarboxylate transporter, dctm subunit) MSMEG_5500 Uncharacterized protein
MSMEG_1061 Phosphohydrolase (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein) MSMEG_5528 Uncharacterized protein
MSMEG_3408 Uncharacterized protein MSMEG_5529 Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein (Uncharacterized protein)
MSMEG_3407 Epoxide hydrolase MSMEG_6474 Nucleoside-diphosphate-sugar epimerase
MSMEG_6170 Uncharacterized protein MSMEG_5439 Resuscitation-promoting factor RpfB (EC 3.-.-.-)
MSMEG_5531 ABC transporter ATP-binding protein MSMEG_0938 Uncharacterized protein
MSMEG_5530 Binding-protein-dependent transport systems inner membrane component (Putative aliphatic sulfonates transport permease protein SsuC) MSMEG_6638 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Cobalamin-independent methionine synthase) (Methionine synthase, vitamin-B12 independent isozyme)
MSMEG_5533 4Fe-4S ferredoxin, iron-sulfur binding (4Fe-4S ferredoxin, iron-sulfur binding protein) MSMEG_0565 Putative glycosyl transferases group 1
MSMEG_5532 FAD dependent oxidoreductase MSMEG_0567 Selenophosphate synthetase
MSMEG_5634 Uncharacterized protein MSMEG_0201 Uncharacterized protein
MSMEG_5635 Uncharacterized protein
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep1
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..isoniazid.treatment
Wild.type.rep2.x
X2XR.rep1
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
Biological.replicate.4.of.6..kanamycin.treatment
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.2.of.6..isoniazid.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.1.of.7..panaxydol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Wild.type.rep1.y
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
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