Module 211 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.0000000000046 | 0.0000000027 | 89 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000046 | |
| Motif 2 |
 |
| e-value: 0.0000000027 |
| MSMEG_0126 Mandelate racemase/muconate lactonizing enzyme (Mandelate racemase/muconate lactonizing protein) (EC 5.1.2.2) | MSMEG_2890 Putative transcriptional regulator |
| MSMEG_6825 Caax amino protease family protein, putative | MSMEG_2888 Alpha/beta hydrolase fold-3 (EC 3.1.1.3) (Lipase) |
| MSMEG_2970 Polysaccharide deacetylase (EC 3.5.1.41) | MSMEG_3759 Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-) |
| MSMEG_0177 ABC polar amino acid family protein transporter, inner membrane subunit | MSMEG_5586 Dihydrodipicolinate reductase (EC 1.17.1.8) (Uncharacterized protein) |
| MSMEG_3707 Uncharacterized protein | MSMEG_0178 ATP-binding protein (Putative ABC transporter ATP-binding protein) (EC 3.6.3.21) |
| MSMEG_3827 Glutamine synthetase | MSMEG_5583 HNH endonuclease |
| MSMEG_3758 Tyrosine--tRNA ligase (EC 6.1.1.1) | MSMEG_5584 Short chain dehydrogenase |
| MSMEG_0176 Glutamine ABC transporter periplasmic-binding protein | MSMEG_0124 GntR family regulatory protein (Transcriptional regulator, GntR family protein) |
| MSMEG_3828 Glutamate-ammonia ligase (EC 6.3.1.2) (Glutamine synthetase) | MSMEG_3760 Uncharacterized protein |
| MSMEG_2969 NADH:flavin oxidoreductase/NADH oxidase (NADH:flavin oxidoreductase/nadh oxidase) | MSMEG_3761 Clp, N terminal (Putative Clp protease subunit) |
KO_stationary.phase_rep2
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
Bedaquiline.vs..DMSO..45min
DamtR.with.vs..DamtR.without.N_.rep1
DamtR.with.vs..DamtR.without.N_.rep2
WT.vs..DamtR.N.surplus_rep2
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4dbfcy5plogcy3slide901norm
Bedaquiline.vs..DMSO.120min
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate1
Biological.replicate.2.of.7..panaxydol.treatment
dosR.WT_Replicate4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.3.of.6..negative.control
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
rel.knockout.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DglnR.N_starvation_rep2
X2XR.rep1
Sub.MIC.INH
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.15min
MB100pruR.vs..MB100..rep.3
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.3.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
WT_stationary.phase_rep1
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X4dbfcy5plogcy3slide480norm
Plogcy5plogcy3slide113norm
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
KO_log.phase_rep1
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.7.of.7..ethambutol.treatment
Wild.type.rep3
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.2.of.7..ethambutol.treatment
dcpA.knockout.rep1
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X4XR.rep2
X4XR.rep1
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Comments
Log in to post comments