Module 261 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.48 4.7e-17 0.0000000000000074 84 32 20160204
Motif 1
e-value: 4.7e-17
e-value: 0.0000000000000074
MSMEG_4543 ABC transporter system integral membrane protein (Binding-protein-dependent transport systems inner membrane component) MSMEG_1083 Uncharacterized protein
MSMEG_4542 Oligopeptide ABC transporter integral membrane protein (Oligopeptide transport integral membrane protein) MSMEG_0391 Rmt3 protein
MSMEG_4541 ABC peptide transporter (ABC transporter, ATP-binding protein) MSMEG_1085 Dipeptide transport system permease protein DppB (Putative didpeptide ABC transporter permease protein)
MSMEG_4982 Uncharacterized protein MSMEG_1084 ABC transporter, solute-binding protein (EC 3.1.3.26) (Peptide/opine/nickel uptake family protein ABC transporter, periplasmic substrate-binding protein, putative)
MSMEG_2311 MSMEG_1086 ABC transporter permease protein (ABC-type oligopeptide transport systems, permease component)
MSMEG_3681 Uncharacterized protein MSMEG_1844 Uncharacterized protein
MSMEG_5599 Uncharacterized protein MSMEG_6454 Uncharacterized protein
MSMEG_5597 TetR family transcriptional regulator (Transcriptional regulator, TetR family protein) MSMEG_6452 [NADP+] succinate-semialdehyde dehydrogenase (EC 1.2.1.16)
MSMEG_0554 ABC transporter permease protein, putative (Binding-protein-dependent transport systems inner membrane component) MSMEG_6600 Transposase
MSMEG_0555 ABC transporter permease protein (Binding-protein-dependent transport systems inner membrane component) MSMEG_0182 Epoxide hydrolase (EC 3.3.2.-) (Epoxide hydrolase 1) (EC 3.3.2.9)
MSMEG_0556 ABC transporter related protein (ABC transporter, nucleotide binding/ATPase protein) MSMEG_4162 Uncharacterized protein
MSMEG_0553 Probable sugar ABC transporter, substrate-binding protein, putative MSMEG_5684 Phosphoserine aminotransferase (EC 2.6.1.52) (Phosphohydroxythreonine aminotransferase)
MSMEG_6317 Lipolytic enzyme, G-D-S-L MSMEG_4983 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein)
MSMEG_0157 Oxalyl-CoA decarboxylase (EC 4.1.1.8) (Oxalyl-CoA decarboxylase OxcA) MSMEG_0634 PAP2 superfamily protein (Phosphoesterase, PA-phosphatase related protein)
MSMEG_0231 Uncharacterized protein MSMEG_4981 Aminoglycoside phosphotransferase (Phosphotransferase enzyme family protein, putative)
MSMEG_0232 Conserved integral membrane protein (Sugar transporter family protein) MSMEG_6825 Caax amino protease family protein, putative
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
Biological.replicate.4.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
Wild.type.rep1.y
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep2
X4XR.rep1
Biological.replicate.1.of.7..falcarinol.treatment
X2XR.rep2
Biological.replicate.6.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT.with.vs..without.N_dye.swap_rep1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
Biological.replicate.7.of.7..panaxydol.treatment
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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