Module 275 Residual: 0.64
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.64 | 2.1e-37 | 0.00031 | 82 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.1e-37 | |
| Motif 2 |
 |
| e-value: 0.00031 |
| MSMEG_3427 Beta-lactamase-like protein (Metal dependent hydrolase) | MSMEG_6605 PadR-like family transcriptional regulator (Transcriptional regulatory protein) |
| MSMEG_3426 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_6603 NADH:flavin oxidoreductase/nadh oxidase |
| MSMEG_0640 Oligopeptide transport ATP-binding protein OppD (Oligopeptide/dipeptide ABC transporter, ATPase subunit) (EC 3.6.3.27) | MSMEG_5540 Uncharacterized protein |
| MSMEG_0641 Binding-protein-dependent transport systems inner membrane component | MSMEG_1967 TetR-family protein transcriptional regulator (Transcriptional regulator, TetR family) |
| MSMEG_0642 Binding-protein-dependent transport systems inner membrane component (Hypothetical ABC transporter permease protein YliD) | MSMEG_5542 Transcriptional regulator, HTH_3 family protein |
| MSMEG_0643 ABC transporter solute-binding protein (Extracellular solute-binding protein, family protein 5, putative) | MSMEG_0639 ABC transporter ATP-binding protein (Oligopeptide transport ATP-binding protein AppF) |
| MSMEG_0644 Cupin domain protein | MSMEG_2503 Bacterial periplasmic substrate-binding protein (Uncharacterized protein) |
| MSMEG_2499 ABC transporter, membrane spanning protein, putative (ABC transporter, permease protein) | MSMEG_2502 Transporter ATPase |
| MSMEG_4019 AMP-dependent synthetase and ligase | MSMEG_2505 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
| MSMEG_2501 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit (Binding-protein-dependent transport systems inner membrane component) | MSMEG_2504 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
| MSMEG_4020 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17) (Enoyl-CoA hydratase/isomerase family protein) | MSMEG_2507 IclR-family protein transcriptional regulator |
| MSMEG_4021 Uncharacterized protein | MSMEG_2506 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Isocitrate lyase family protein) (EC 4.1.3.32) |
| MSMEG_4022 TetR-family protein transcriptional regulator (Transcriptional regulatory repressor protein (Tetr-family) Ethr) | MSMEG_1966 Uncharacterized protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
X3dbfcy5plogcy3slide603norm
Biological.replicate.4.of.7..ethambutol.treatment
X2XR.rep1
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.1.of.6..negative.control
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
DglnR_without.vs..with.N_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Sub.MIC.INH
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Biological.replicate.5.of.6..negative.control
X4dbfcy5plogcy3slide480norm
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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