Module 319 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 5.5e-29 | 4.3e-16 | 83 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.5e-29 | |
| Motif 2 |
 |
| e-value: 4.3e-16 |
| MSMEG_5157 Uncharacterized protein | MSMEG_5156 Base excision DNA repair protein, HhH-GPD family protein (EC 5.1.1.1) |
| MSMEG_3659 TetR-family protein transcriptional regulator (Transcriptional regulator, TetR family) | MSMEG_0188 MarR-family protein transcriptional regulator |
| MSMEG_5687 23s ribosomal RNA methyltransferase (tRNA/rRNA methyltransferase (SpoU)) | MSMEG_6353 Delta3,5-delta2,4-dienoyl-CoA isomerase (EC 5.3.3.-) (Enoyl-CoA hydratase EchA21) (EC 4.2.1.17) |
| MSMEG_2660 Transcriptional regulator, AsnC family protein | MSMEG_0244 Two component response transcriptional regulatory protein prra |
| MSMEG_2659 Alanine dehydrogenase (EC 1.4.1.1) | MSMEG_6351 Putative phenylalanine aminotransferase (EC 2.6.1.-) |
| MSMEG_5689 Uncharacterized protein | MSMEG_0246 Sensor-type histidine kinase PrrB (Sensor-type histidine kinase prrB) (EC 2.7.13.3) |
| MSMEG_5688 MarR-family transcriptional regulator (Regulatory protein, MarR) | MSMEG_3660 Uncharacterized protein |
| MSMEG_5690 Cyclase/dehydrase (Uncharacterized protein) | MSMEG_5449 Uncharacterized protein |
| MSMEG_1919 Transcriptional regulator WhiB | MSMEG_6352 Uncharacterized protein |
| MSMEG_0186 MmpS2 (MmpS2 protein) | MSMEG_0243 Uncharacterized protein |
| MSMEG_1944 Membrane protein |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Biological.replicate.3.of.6..kanamycin.treatment
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
X3dbfcy5plogcy3slide601norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.4.of.6..negative.control
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
WT.vs..DamtR.N.surplus_dyeswap_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
Biological.replicate.7.of.7..panaxydol.treatment
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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