Module 327 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 4400 | 29000 | 70 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4400 | |
| Motif 2 |
 |
| e-value: 29000 |
| MSMEG_6840 LysR-family protein transcriptional regulator | MSMEG_0874 Transcriptional regulator, GntR family protein |
| MSMEG_6864 Putative transcription regulator (Transcriptional regulator IclR) | MSMEG_4161 Uncharacterized protein |
| MSMEG_3335 Transcriptional regulator, IclR family (Transcriptional regulator, IclR family protein, putative) | MSMEG_6902 Putative membrane protein |
| MSMEG_5205 Uncharacterized protein | MSMEG_2809 MxaD protein (Uncharacterized protein) |
| MSMEG_4701 Single-stranded DNA-binding protein | MSMEG_6140 Membrane protein |
| MSMEG_6292 Transcription elongation factor (Transcription elongation factor GreA) | MSMEG_2537 Transporter protein |
| MSMEG_4160 Uncharacterized protein | MSMEG_1773 Uncharacterized protein |
| MSMEG_3379 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) | MSMEG_5350 PPE family protein, putative |
| MSMEG_6375 Transporter, major facilitator family protein | MSMEG_4061 Translation initiation inhibitor |
| MSMEG_0119 Uncharacterized protein | MSMEG_4595 Probable serine/threonine-protein kinase PknH, putative (EC 2.7.11.1) |
| MSMEG_1204 3-oxoacyl-(Acyl-carrier-protein) synthase 2 KasB (EC 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase 2) | MSMEG_3679 Phosphohydrolase |
| MSMEG_1302 Alkylphosphonate uptake protein | MSMEG_1177 Cytosine/purines/uracil/thiamine/allantoin permease family protein (Permease for cytosine/purines uracil thiamine allantoin) |
| MSMEG_1323 Uncharacterized protein | MSMEG_1316 Peptide chain release factor 3 |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
X4XR.rep1
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dosR.WT_Replicate4
Wild.type.rep1.x
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Sub.MIC.INH
Biological.replicate.2.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Bedaquiline.vs..DMSO.60min
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.1.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Plogcy5plogcy3slide113norm
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
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