Module 340 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 1.2e-30 | 0.014 | 76 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.2e-30 | |
| Motif 2 |
 |
| e-value: 0.014 |
| MSMEG_6630 Uncharacterized protein MSMEG_6630 | MSMEG_3978 Beta-lactamase (EC 3.5.2.6) |
| MSMEG_1181 Formiminoglutamate deiminase (EC 3.-.-.-) (EC 3.5.3.13) | MSMEG_3258 Uncharacterized protein |
| MSMEG_6501 Uncharacterized protein | MSMEG_3259 Acyl-CoA dehydrogenase (EC 1.3.8.-) |
| MSMEG_0534 Major facilitator superfamily MFS_1 (Permease, major facilitator family protein) | MSMEG_6329 Uncharacterized protein |
| MSMEG_4732 Glycosyl transferase, group 2 family protein, putative | MSMEG_1393 Conserved threonine rich protein (Uncharacterized protein) |
| MSMEG_5309 Transcriptional regulator (Uncharacterized protein) | MSMEG_1395 Lipoprotein, putative |
| MSMEG_0315 Conserved transmembrane protein (Probable conserved transmembrane protein) | MSMEG_1394 Conserved transmembrane protein (Probable conserved transmembrane protein) |
| MSMEG_5871 HIT family protein | MSMEG_1396 LprB protein |
| MSMEG_3829 Alpha/beta hydrolase fold-3 (EC 3.1.1.1) (Esterase) | MSMEG_2401 Uncharacterized protein |
| MSMEG_0015 Ferric enterobactin ABC transporter, ATP-binding protein FepC (Ferric enterobactin transport ATP-binding protein FepC) | MSMEG_5868 Uncharacterized protein |
| MSMEG_6623 Dehydrogenase (Short-chain dehydrogenase/reductase SDR) | MSMEG_4591 Uncharacterized protein |
| MSMEG_3309 Tryptophan synthase (EC 4.2.1.20) | MSMEG_3830 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_6454 Uncharacterized protein | MSMEG_0048 Pyridoxamine 5'-phosphate oxidase family protein (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein) |
| MSMEG_6452 [NADP+] succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Wild.type.rep2.x
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.5.of.7..ethambutol.treatment
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.2.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
X4XR.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DglnR_without.vs..with.N_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
dosR.WT_Replicate4
Plogcy5plogcy3slide113norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
dosR.WT_Replicate2
Bedaquiline.vs..DMSO.120min
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