Module 355 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 5.3e-18 | 0.000000038 | 85 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.3e-18 | |
| Motif 2 |
 |
| e-value: 0.000000038 |
| MSMEG_2075 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) | MSMEG_2070 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase family protein) |
| MSMEG_2074 Alpha/beta hydrolase fold protein (Uncharacterized protein) | MSMEG_1350 Cyclopropane-fatty-acyl-phospholipid synthase 1 (Mycolic acid synthase UmaA) (EC 2.1.1.79) |
| MSMEG_2071 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_2455 Carbon monoxide dehydrogenase subunit G (Carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein) |
| MSMEG_1897 3-oxoadipate enol-lactonase (EC 3.1.1.24) | MSMEG_1171 Low molecular weight phosphotyrosine protein phosphatase (Putative arsenate reductase ArsC) (EC 1.20.4.1) |
| MSMEG_2073 CAIB/BAIF family protein (L-carnitine dehydratase/bile acid-inducible protein F) (EC 2.8.3.16) | MSMEG_1896 Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Beta-ketothiolase) |
| MSMEG_2072 3-hydroxy-3-methylglutaryl-CoA lyase (Hydroxymethylglutaryl-CoA lyase) (EC 4.1.3.4) | MSMEG_1173 ArsR family transcriptional regulator (Transcriptional regulator, ArsR family protein) |
| MSMEG_1898 3-oxoacid CoA-transferase, A subunit (EC 2.8.3.5) (Succinyl-CoA:3-ketoacid-coenzyme A transferase 1) | MSMEG_1172 Arsenic-transport integral membrane protein ArsC (EC 1.20.4.1) (Arsenical-resistance protein) |
| MSMEG_1899 3-oxoacid CoA-transferase, B subunit (EC 2.8.3.-) (Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B) (EC 2.8.3.5) | MSMEG_1175 Putative transcriptional regulatory protein (Putative transcriptional regulatory protein (Probably arsR-family)) |
| MSMEG_2068 Uncharacterized protein | MSMEG_1174 Cadmium inducible protein cadi (Putative glyoxalase/bleomycin resistance or cadmium-induced protein CadI) |
| MSMEG_2069 Phosphotransferase enzyme family protein | MSMEG_1895 HTH-type transcriptional regulator AlsR (LysR-type transcriptional regulator) |
KO_stationary.phase_rep1
Wild.type.rep2.y
Biological.replicate.4.of.6..negative.control
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
X4XR.rep1
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
stphcy5plogcy3slide487norm
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Plogcy5plogcy3slide110norm
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.3.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Biological.replicate.6.of.6..kanamycin.treatment
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Biological.replicate.5.of.7..falcarinol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
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