Module 359 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 0.0000000000000042 | 0.000019 | 81 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000042 | |
| Motif 2 |
 |
| e-value: 0.000019 |
| MSMEG_0139 MCE-family protein MCE1f (Mce-family protein mce1f) | MSMEG_5478 Hydroxypyruvate isomerase (EC 5.3.1.22) |
| MSMEG_6295 Shikimate transporter (Uncharacterized protein) | MSMEG_5479 Type I antifreeze protein |
| MSMEG_6294 Caib/baif family protein (L-carnitine dehydratase/bile acid-inducible protein F) (EC 2.8.3.16) | MSMEG_5476 Glyoxylate carboligase (EC 4.1.1.47) |
| MSMEG_1686 NLP/P60-family secreted protein (EC 3.2.1.14) (NPL/P60-family protein secreted protein) | MSMEG_5477 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) |
| MSMEG_0138 Virulence factor Mce family protein | MSMEG_3799 Uncharacterized protein |
| MSMEG_3800 Uncharacterized protein | MSMEG_3798 Uncharacterized protein |
| MSMEG_0132 Conserved hypothetical integral membrane protein Yrbe1a (Uncharacterized protein) | MSMEG_4846 Probable enoyl-CoA hydratase (EC 4.2.1.17) |
| MSMEG_0133 ABC-transporter integral membrane protein (Conserved hypothetical integral membrane protein Yrbe1b) | MSMEG_4847 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_0130 Transcriptional regulator, GntR family protein | MSMEG_2742 DNA-damage-inducible protein |
| MSMEG_0131 AMP-binding enzyme, putative | MSMEG_2741 Uncharacterized protein |
| MSMEG_0134 MCE-family protein MCE1a (Virulence factor Mce family protein) | MSMEG_2740 LexA repressor (EC 3.4.21.88) |
| MSMEG_0135 MCE-family protein MCE1b (Virulence factor Mce family protein) | MSMEG_0168 Formyl-CoA:oxalate CoA-transferase (FCOCT) (EC 2.8.3.16) (Formyl-coenzyme A transferase) |
Wild.type.rep2.x
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
Biological.replicate.5.of.7..falcarinol.treatment
X4XR.rep1
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.5.of.6..kanamycin.treatment
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
stphcy3plogcy5slide581norm
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
Biological.replicate.3.of.6..kanamycin.treatment
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
mc2155.vs.Dcrp1.replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Sub.MIC.INH
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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