Module 375 Residual: 0.53Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.53	0.0056	52	76	17	20160204

Motifs

Motif 1
	e-value: 0.0056
Motif 2
	e-value: 52

Module Plots

Members

MSMEG_2066 Uncharacterized protein	MSMEG_5407 Integral membrane protein (Putative integral membrane protein)
MSMEG_2067 Methyltransferase type 12	MSMEG_4181 Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)
MSMEG_6712 Iron-containing alcohol dehydrogenase (Maleylacetate reductase) (EC 1.3.1.32) (Maleylacetate reductase)	MSMEG_2444 Dienelactone hydrolase (EC 3.1.1.45) (Dienelactone hydrolase family protein)
MSMEG_1005 Methyltransferase type 11	MSMEG_6792 Gluconate permease (Inner membrane permease YgbN)
MSMEG_1621 Pyrimidine-specific ribonucleoside hydrolase RihA (EC 3.2.-.-)	MSMEG_1789 Uncharacterized protein
MSMEG_6947 Chromosomal replication initiator protein DnaA	MSMEG_1788 Uncharacterized protein
MSMEG_2036 Hydrolase, alpha/beta fold family protein (Non-heme haloperoxidase Hpx)	MSMEG_6006 Uncharacterized protein
MSMEG_6438 Uncharacterized protein	MSMEG_1774 Uncharacterized protein
MSMEG_1791 UsfY protein

Conditions

KO_stationary.phase_rep2

Biological.replicate.5.of.7..falcarinol.treatment

X4XR.rep1

WT.vs..DamtR.without.N_rep2

Plogcy5plogcy3slide110norm

Biological.replicate.4.of.7..ethambutol.treatment

Bedaquiline.vs..DMSO.30min

Biological.replicate.1.of.6..negative.control

dosR.WT_Replicate3

Tet.CarD.vs.Control..Replicates.1..2..and.3.

dosR.WT_Replicate1

Biological.replicate.2.of.6..kanamycin.treatment

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.3.of.7..panaxydol.treatment

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep1

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

Biological.replicate.1.of.6..isoniazid.treatment

Biological.replicate.7.of.7..ethambutol.treatment

Biological.replicate.1.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

rel.knockout.rep1

Bedaquiline.vs..DMSO..45min

Biological.replicate.5.of.6..isoniazid.treatment

Biological.replicate.6.of.7..panaxydol.treatment

M..smegmatis.Acid.NO.treated

Biological.replicate.3.of.7..ethambutol.treatment

Biological.replicate.4.of.6..kanamycin.treatment

WT_log.phase_rep2

X0.6..vs..50..air.saturation.Replicate.3

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

X0.6..vs..50..air.saturation.Replicate.4

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2

Biological.replicate.5.of.6..kanamycin.treatment

Biological.replicate.7.of.7..panaxydol.treatment

X3dbfcy3plogcy5slide607norm

dcpA.knockout.rep1

Plogcy5plogcy3slide111norm

X3dbfcy5plogcy3slide601norm

X2.5..vs..50..air.saturation.Replicate.5

stphcy3plogcy5slide581norm

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.3

WT_stationary.phase_rep2

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.6.of.6..isoniazid.treatment

X4XR.rep2

Biological.replicate.5.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

Bedaquiline.vs..DMSO.60min

Biological.replicate.4.of.7..falcarinol.treatment

Slow.vs..Fast.Replicate.1

Biological.replicate.6.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate2

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

Wild.type.rep3

X4dbfcy5plogcy3slide901norm

WT.vs..DamtR.N.surplus_.dyeswap_rep1

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.1.of.7..falcarinol.treatment

X2XR.rep1

Biological.replicate.1.of.7..panaxydol.treatment

Slow.vs..Fast.Replicate.2

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

Plogcy5plogcy3slide113norm

dosR.WT_Replicate2

Biological.replicate.4.of.6..isoniazid.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

Biological.replicate.1.of.6..kanamycin.treatment

Bedaquiline.vs..DMSO.120min

Comments