Module 383 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.53 6.2e-32 0.000000000041 80 27 20160204
Motif 1
e-value: 6.2e-32
e-value: 0.000000000041
MSMEG_3373 Major facilitator superfamily protein MFS_1 MSMEG_0834 Putative tuberculin related peptide (Tuberculin related peptide)
MSMEG_3372 Transcriptional regulator, ArsR family (Transcriptional regulator, ArsR family protein) MSMEG_2963 Bacterial extracellular solute-binding protein, family protein 5 (Extracellular solute-binding protein)
MSMEG_4917 Tetratricopeptide repeat domain protein (Thioredoxin) MSMEG_1427 Transmembrane efflux protein
MSMEG_1430 Transcriptional regulator, TetR family protein MSMEG_2309
MSMEG_4919 Uncharacterized protein MSMEG_2308
MSMEG_1245 Phosphoadenosine phosphosulfate reductase MSMEG_0082 Conserved membrane protein (Uncharacterized protein)
MSMEG_1244 Uncharacterized protein MSMEG_0083 Membrane-anchored mycosin mycp1 (Peptidase S8 and S53, subtilisin, kexin, sedolisin)
MSMEG_1243 Uncharacterized protein MSMEG_6300 Transcriptional regulator, GntR family protein
MSMEG_1242 Cysteine desulfurase IscS (EC 4.4.1.-) (NifS-like class-V aminotransferase, probable cysteine desulfurase) (EC 2.8.1.7) MSMEG_6680 Integral membrane protein (Uncharacterized protein)
MSMEG_2868 Transcriptional regulator, PadR family (Transcriptional regulator, PadR family protein) MSMEG_6681 Uncharacterized protein
MSMEG_2866 Thioesterase family protein (Thioesterase superfamily) MSMEG_2172 Dicarboxylate carrier MatC domain protein (Dicarboxylate-carrier protein)
MSMEG_4204 Catalase (Uncharacterized protein) MSMEG_2173 GntR-family protein transcriptional regulator (GntR-family transcriptional regulator)
MSMEG_0836 Putative glutamate--cysteine ligase 2-1 (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase 2-1) (GCS 2-1) (Gamma-GCS 2-1) MSMEG_1028 Geranylgeranyl reductase
MSMEG_0835 Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
dcpA.knockout.rep2
Biological.replicate.4.of.6..negative.control
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.1.of.6..isoniazid.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.7..ethambutol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Sub.MIC.INH
Biological.replicate.2.of.7..falcarinol.treatment
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..negative.control
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dosR.WT_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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