Module 394 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.51 0 0 84 25 20160204
Motif 1
e-value: 0
e-value: 0
MSMEG_2977 Uncharacterized protein MSMEG_5210 Alpha/beta hydrolase fold protein (Hydrolase)
MSMEG_2129 Uncharacterized protein MSMEG_5213 Uncharacterized protein
MSMEG_4872 Short chain dehydrogenase MSMEG_0284 NAD(P)H dehydrogenase (Quinone) (EC 1.6.-.-) (Ribosyldihydronicotinamide dehydrogenase (Quinone)) (EC 1.10.99.2)
MSMEG_2277 DNA ligase B (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) MSMEG_0285 Transcriptional regulator TetR family protein
MSMEG_2254 Oxalate decarboxylase OxdC, putative (EC 4.1.1.2) MSMEG_6574 UPF0678 fatty acid-binding protein-like protein MSMEG_6574/MSMEI_6396
MSMEG_3775 Arginine biosynthesis bifunctional protein ArgJ MSMEG_6575 Beta-lactamase (Lipase LipE)
MSMEG_3774 Acetylglutamate kinase (EC 2.7.2.8) (N-acetyl-L-glutamate 5-phosphotransferase) (NAG kinase) (AGK) MSMEG_2668 Uncharacterized protein
MSMEG_3776 N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (EC 1.2.1.38) (N-acetyl-glutamate semialdehyde dehydrogenase) MSMEG_1676 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
MSMEG_3771 Arginine repressor MSMEG_2663 Uncharacterized protein
MSMEG_3773 Acetylornithine aminotransferase (ACOAT) (EC 2.6.1.11) MSMEG_2664 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8)
MSMEG_3772 Ornithine carbamoyltransferase (OTCase) (EC 2.1.3.3) MSMEG_2665 Tetratricopeptide TPR_2 (Uncharacterized protein)
MSMEG_4341 Uncharacterized protein MSMEG_2666 Multimeric flavodoxin WrbA (Uncharacterized protein)
MSMEG_4344 Putative monooxygenase
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
rel.knockout.rep2
rel.knockout.rep1
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.7.of.7..panaxydol.treatment
X3dbfcy3plogcy5slide607norm
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
Wild.type.rep2.x
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Wild.type.rep1.y
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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