Module 483 Residual: 1.00Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
1.00			77	0	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

Conditions

WT.vs..DglnR.N_starvation_rep2

X4XR.rep1

dcpA.knockout.rep2

M..smegmatis.Acid.NO.treated

Mycobacterium.smegmatis.Spheroplast.induced

dosR.WT_Replicate4

Biological.replicate.3.of.7..ethambutol.treatment

MB100pruR.vs..MB100..rep.3

Biological.replicate.4.of.6..negative.control

Slow.vs..Fast.Replicate.2

KO_log.phase_rep2

Wild.type.rep2.y

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

MB100pruR.vs..MB100.rep.4

Biological.replicate.6.of.6..negative.control

DglnR_without.vs..with.N_rep2

MB100pruR.vs..MB100.rep.1

Biological.replicate.1.of.6..isoniazid.treatment

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.6..kanamycin.treatment

rel.knockout.rep1

WT.vs..DamtR.without.N_rep2

DamtR.with.vs..DamtR.without.N_.rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

Biological.replicate.4.of.6..kanamycin.treatment

WT.vs..DamtR.without.N_.dyeswap_rep1

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.2

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

X0.6..vs..50..air.saturation.Replicate.4

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

mc2155.vs.Dcrp1.replicate.2

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.2.of.7..ethambutol.treatment

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

Biological.replicate.5.of.7..panaxydol.treatment

dcpA.knockout.rep1

Sub.MIC.INH

Plogcy5plogcy3slide111norm

Biological.replicate.5.of.6..negative.control

WT_log.phase_rep2

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

X3dbfcy3plogcy5slide607norm

WT_log.phase_rep1

X2.5..vs..50..air.saturation.Replicate.2

WT.with.vs..without.N_dye.swap_rep2

Biological.replicate.2.of.6..kanamycin.treatment

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

Biological.replicate.5.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

Bedaquiline.vs..DMSO.60min

WT.vs..DglnR.N_starvation_dye.swap_rep1

Biological.replicate.6.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.3

dosR.WT_Replicate3

mc2155.pMind..vs.mc2155.pMind.6189.replicate.4

Biological.replicate.4.of.6..isoniazid.treatment

X4dbfcy5plogcy3slide901norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.vs..DglnR.N_starvation_rep1

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_rep1

WT.vs..DglnR.N_starvation_dye.swap_rep2

BatchCulture_LBTbroth_StationaryPhase_Replicate4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

Plogcy5plogcy3slide113norm

BatchCulture_LBTbroth_StationaryPhase_Replicate3

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

BatchCulture_LBTbroth_StationaryPhase_Replicate1

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

X4dbfcy3plogcy5slide903norm

WT.vs..DamtR.N.surplus_rep2

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