Module 485 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 3.6e-21 | 0.00079 | 83 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.6e-21 | |
| Motif 2 |
 |
| e-value: 0.00079 |
| MSMEG_5672 Citrate synthase | MSMEG_1123 Cobalamin synthesis protein |
| MSMEG_2273 [NiFe] hydrogenase maturation protein HypF | MSMEG_5412 Immunogenic protein MPT63 (Uncharacterized protein) |
| MSMEG_2272 Hydrogenase expression/synthesis, HypA (Hydrogenase nickel insertion protein HypA) | MSMEG_0733 Dihydrodipicolinate reductase (EC 1.17.1.8) (Dihydrodipicolinate reductase, N-terminus domain protein) |
| MSMEG_2271 Hydrogenase accessory protein HypB | MSMEG_0734 Rieske (2Fe-2S) region (Rieske [2Fe-2S] domain protein) |
| MSMEG_2276 Hydrogenase expression/formation protein HypE | MSMEG_0735 Putative transcriptional regulator |
| MSMEG_1807 Acetyl-/propionyl-coenzyme A carboxylase alpha chain (EC 6.3.4.14) (Putative biotin-dependent acetyl/propionyl-CoA (Acyl-CoA) carboxylase) (EC 6.3.4.14) | MSMEG_2931 Threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS) |
| MSMEG_2274 Hydrogenase assembly chaperone HypC/HupF (Hydrogenase assembly chaperone hypC/hupF) | MSMEG_2932 HIT family protein hydrolase (Histidine triad (HIT) protein) |
| MSMEG_6078 LpqE protein (Uncharacterized protein) | MSMEG_2933 Phosphatidylinositol synthase (Putative pi synthase Pgsa1 (Phosphatidylinositol synthase) (Cdp-diacylglycerol--inositol3-phosphatidyltransferase)) (EC 2.7.8.-) |
| MSMEG_6077 RNA polymerase-binding transcription factor CarD | MSMEG_2934 Phosphatidylinositol mannoside acyltransferase (PIM acyltransferase) (EC 2.3.1.-) |
| MSMEG_1122 Uncharacterized protein | MSMEG_2935 GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase (EC 2.4.1.57) (Alpha-mannosyltransferase) (Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase) (Phosphatidylinositol alpha-mannosyltransferase) (PI alpha-mannosyltransferase) |
| MSMEG_2275 Hydrogenase expression/formation protein HypD | MSMEG_2936 Hydrolase, nudix family protein (NUDIX hydrolase) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
Biological.replicate.4.of.7..ethambutol.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
KO_log.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.7.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
Biological.replicate.5.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.1.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.1.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
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