Module 511 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.56 8.7e-21 0.0000000017 81 26 20160204
Motif 1
e-value: 8.7e-21
e-value: 0.0000000017
MSMEG_4600 Uncharacterized protein MSMEG_4693 Uncharacterized protein
MSMEG_4602 Uncharacterized protein MSMEG_4692 Uncharacterized protein MSMEG_4692/MSMEI_4575
MSMEG_5046 Drug resistance transporter EmrB/QacA subfamily (Drug transporter) MSMEG_5863 Cytochrome P450 51 (Cytochrome P450 CYP51) (EC 1.14.13.70)
MSMEG_4622 TetR family transcriptional regulator (Transcriptional regulator, TetR family protein) MSMEG_4599 Uncharacterized protein
MSMEG_2575 Putative conserved transmembrane protein (Uncharacterized protein) MSMEG_5865 Uncharacterized protein
MSMEG_0683 Uncharacterized protein MSMEG_5864 Cytochrome P450 51 (Putative ferredoxin)
MSMEG_0573 Putative ECF sigma factor RpoE1 MSMEG_6200 Uncharacterized protein
MSMEG_0882 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein (Uncharacterized protein) MSMEG_6201 Transglycosylase
MSMEG_2431 Amidohydrolase (Amidohydrolase 3) MSMEG_1255 DNA helicase (EC 3.6.4.12)
MSMEG_2430 Signal recognition particle protein (Fifty-four homolog) MSMEG_1697 Uncharacterized protein
MSMEG_6088 Phosphoglycerate mutase (EC 5.4.2.-) MSMEG_4279 Adenylate and Guanylate cyclase catalytic domain protein (Uncharacterized protein)
MSMEG_6089 Conserved membrane protein (Uncharacterized protein) MSMEG_4278 Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein)
MSMEG_4619 Cytochrome P450 124 cyp124 (EC 1.14.13.151) (Putative cytochrome P450 126) (EC 1.14.-.-) MSMEG_0681 P450 heme-thiolate protein
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Bedaquiline.vs..DMSO.15min
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
mc2155.vs.Dcrp1.replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
X2XR.rep2
Biological.replicate.5.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
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