Module 555 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.55 2.9e-19 0.000000000000009 79 29 20160204
Motif 1
e-value: 2.9e-19
e-value: 0.000000000000009
MSMEG_4375 3-oxoacyl-[acyl carrier protein] reductase (Short-chain dehydrogenase/reductase SDR) MSMEG_2107 Uncharacterized protein
MSMEG_4376 3-oxoacyl-[acyl-carrier-protein] reductase (Short-chain dehydrogenase/reductase SDR) MSMEG_1386 Uncharacterized protein
MSMEG_4377 Amino acid permease family protein, putative (Amino acid permease-associated region) MSMEG_1384 Uncharacterized protein
MSMEG_4568 Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z) MSMEG_3428 Uncharacterized protein
MSMEG_2839 Transcriptional accessory protein MSMEG_2452 Uncharacterized protein
MSMEG_1066 Uncharacterized protein MSMEG_4896 Non-ribosomal peptide synthetase
MSMEG_1065 Uncharacterized protein MSMEG_5016 Conserved domain protein (Heavy metal transport/detoxification protein)
MSMEG_1064 Low-affinity inorganic phosphate transporter, PitA (Phosphate/sulphate permease) MSMEG_5014 Copper-translocating P-type ATPase (EC 3.6.3.4) (Heavy metal translocating P-type ATPase) (EC 3.6.3.4)
MSMEG_1063 Uncharacterized protein MSMEG_0258 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100)
MSMEG_1800 Uncharacterized protein MSMEG_3368 Uncharacterized protein
MSMEG_3567 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) MSMEG_5027 Glyoxalase family protein (Glyoxalase/bleomycin resistance protein/dioxygenase) (EC 4.4.1.5)
MSMEG_5180 Uncharacterized protein MSMEG_0260 DNA-binding protein
MSMEG_2341 Uncharacterized protein MSMEG_2876 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short chain dehydrogenase/reductase SDR) (EC 1.1.1.184)
MSMEG_2105 ATP dependent DNA ligase (DNA primase, small subunit) MSMEG_5028 HIT family protein (Histidine triad (HIT) protein) (EC 3.6.1.17)
MSMEG_4850 Short-chain dehydrogenase/reductase SDR
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate1
KO_log.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep1.y
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO..45min
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Slow.vs..Fast.Replicate.3
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
X3dbfcy5plogcy3slide603norm
mc2155.vs.Dcrp1.replicate.1
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.120min
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