Module 579 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 7.9e-18 | 0.000014 | 76 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 7.9e-18 | |
| Motif 2 |
 |
| e-value: 0.000014 |
| MSMEG_1598 Uncharacterized protein | MSMEG_5666 Uncharacterized protein |
| MSMEG_6158 Uncharacterized protein | MSMEG_5661 ABC transporter ATP-binding protein (Putative multidrug ABC transporter, fused permease and ATP-binding protein) |
| MSMEG_5659 ABC transporter, ATP-binding protein | MSMEG_5660 ABC transporter (ABC transporter ATP-binding protein) |
| MSMEG_4443 Uncharacterized protein | MSMEG_5663 Sensor-type histidine kinase PrrB (EC 2.7.13.3) (Sensor-type histidine kinase prrB) |
| MSMEG_1860 Uncharacterized protein | MSMEG_5662 DNA-binding response regulator PrrA (Two component transcriptional regulator, winged helix family) |
| MSMEG_2314 | MSMEG_3141 Conserved domain protein (Putative transcriptional regulatory protein) |
| MSMEG_6404 UDP-galactopyranose mutase (UDP-galactopyranose mutase Glf) (EC 5.4.99.9) | MSMEG_1859 Uncharacterized protein |
| MSMEG_6405 Erp protein (Uncharacterized protein) | MSMEG_1034 Conserved hypothetical membrane protein (Putative esterase family protein) |
| MSMEG_1641 Pentapeptide repeat protein MfpA (Mycobacterial fluoroquinone resistance pentapeptide) (Orf3) | MSMEG_2078 Diacylglycerol acyltransferase/mycolyltransferase Ag85B (DGAT) (EC 2.3.1.122) (EC 2.3.1.20) (30 kDa extracellular protein) (Acyl-CoA:diacylglycerol acyltransferase) (Antigen 85 complex B) (85B) (Ag85B) (Extracellular alpha-antigen) (Fibronectin-binding protein B) (Fbps B) |
| MSMEG_6401 Decaprenyl-phosphate phosphoribosyltransferase (EC 2.4.2.45) (5-phospho-alpha-D-ribose-1-diphosphate:decaprenyl-phosphate 5-phosphoribosyltransferase) (DPPR synthase) | MSMEG_2381 Uncharacterized protein |
| MSMEG_6402 Putative decaprenylphosphoryl-5-phosphoribose phosphatase MSMEG_6402 (DPPR phosphatase) (EC 3.1.3.-) (Phospholipid phosphatase) | MSMEG_2380 Sugar transporter family protein |
| MSMEG_6403 Galactofuranosyl transferase GlfT2 (GalTr) (EC 2.4.1.288) (Beta-D-(1->5)galactofuranosyltransferase) (Beta-D-(1->6)galactofuranosyltransferase) (Galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase) (UDP-Galf:alpha-3-L-rhamnosyl-alpha-D-GlcNAc-pyrophosphate polyprenol, UDP-galactofuranosyl transferase) | MSMEG_4195 Uncharacterized protein |
| MSMEG_1934 ATP-binding protein (Uncharacterized protein) | MSMEG_4196 Lipoprotein lppL (LppL protein) |
| MSMEG_5052 DNA-binding protein (Helix-turn-helix domain protein) | MSMEG_4197 Uncharacterized protein |
| MSMEG_5664 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) | MSMEG_4259 DNA polymerase III, epsilon subunit |
| MSMEG_5667 Oxidoreductase (Phytoene dehydrogenase) |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
rel.knockout.rep2
Wild.type.rep3
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
dosR.WT_Replicate2
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..negative.control
Biological.replicate.3.of.6..kanamycin.treatment
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
X2XR.rep1
WT.vs..DglnR.N_starvation_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
Comments
Log in to post comments