Module 601 Residual: 0.61
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.61 | 0.000000032 | 0.041 | 76 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000032 | |
| Motif 2 |
 |
| e-value: 0.041 |
| MSMEG_4792 Virulence factor Mce family protein (Virulence factor mce family protein) | MSMEG_0765 Zinc finger, UBP-type |
| MSMEG_4793 Virulence factor Mce family protein | MSMEG_4180 ATP phosphoribosyltransferase (ATP-PRT) (ATP-PRTase) (EC 2.4.2.17) |
| MSMEG_3139 Enoyl-CoA hydratase/isomerase | MSMEG_6165 Uncharacterized protein |
| MSMEG_4794 Virulence factor (Virulence factor Mce family protein) | MSMEG_4024 Transcriptional regulator, TetR family protein |
| MSMEG_3529 Fatty acid hydroxylase | MSMEG_3140 ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein (ABC transporter related protein) |
| MSMEG_3352 Uncharacterized protein | MSMEG_1195 Uncharacterized protein |
| MSMEG_4563 GCN5-related N-acetyltransferase (Puromycin N-acetyltransferase) (EC 2.3.-.-) | MSMEG_1194 Uncharacterized protein |
| MSMEG_3506 Putative amino acid decarboxylase, Pyridoxal-dependent protein (EC 4.1.1.-) (Pyridoxal-dependent decarboxylase) (EC 4.1.1.28) | MSMEG_2329 |
| MSMEG_2895 Short chain oxidoreductase (Short-chain dehydrogenase/reductase SDR) | MSMEG_2328 |
| MSMEG_1046 ABC transporter ATP-binding protein (ABC-type molybdenum transport system, ATPase component) | MSMEG_2327 |
| MSMEG_2330 | MSMEG_2326 |
| MSMEG_3509 Uncharacterized protein | MSMEG_6228 Uncharacterized protein |
| MSMEG_5411 Uncharacterized protein | MSMEG_6588 Fumarylacetoacetate |
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT_stationary.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
dosR.WT_Replicate3
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
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