Module 673 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 5e-19 | 0.098 | 82 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5e-19 | |
| Motif 2 |
 |
| e-value: 0.098 |
| MSMEG_4374 Agmatinase (EC 3.5.3.11) | MSMEG_2293 |
| MSMEG_4373 Polysaccharide deacetylase (Polysaccharide deacetylase, putative) | MSMEG_3591 Uncharacterized protein |
| MSMEG_3527 Putative HTH-type transcriptional regulator | MSMEG_3590 Uncharacterized protein |
| MSMEG_3111 Extracellular solute-binding protein (Extracellular solute-binding protein, family protein 1) | MSMEG_5418 Iron permease FTR1 |
| MSMEG_3110 Binding-protein-dependent transport systems inner membrane component | MSMEG_3108 ABC transporter related protein (ABC transporter, ATPase subunit) |
| MSMEG_6567 Iron-dependent peroxidase | MSMEG_3109 Binding-protein-dependent transport systems inner membrane component |
| MSMEG_4155 Transposase A | MSMEG_5416 LpqU protein |
| MSMEG_4156 Putative transposase | MSMEG_3217 Anthranilate synthase component 1 (AS) (ASI) (EC 4.1.3.27) |
| MSMEG_4157 Putative transposase (Tn554 transposase C) | MSMEG_3215 ABC transporter, ATP-binding component (ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA) |
| MSMEG_6569 Putative secreted protein (Uncharacterized protein) | MSMEG_1013 Uncharacterized protein |
| MSMEG_3216 Peroxidoxin BcpB (EC 1.11.1.15) (Peroxiredoxin Q) | MSMEG_2628 Translation initiation factor IF-2 |
| MSMEG_2396 Putative conserved secreted protein (Uncharacterized protein) | MSMEG_2629 Ribosome-binding factor A |
| MSMEG_2631 DNA-damage-inducible protein F DinF (MATE efflux family protein) | MSMEG_3589 Uncharacterized protein |
| MSMEG_2630 DHH family protein |
Wild.type.rep1.y
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
dcpA.knockout.rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.7.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
DglnR_without.vs..with.N_rep1
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Biological.replicate.4.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Wild.type.rep2.y
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
stphcy5plogcy3slide487norm
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Plogcy5plogcy3slide113norm
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
Comments
Log in to post comments