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[+] Show/hide bicluster #3 rows and columns.
bicluster 3
Phaeodactylum tricornutum
28x75
[+] Show/hide bicluster #3 rows (genes).
bicluster 3 genes
Phaeodactylum tricornutum
28
[+] Show/hide bicluster #3 rows (short gene names).
bicluster 3 short names
Phaeodactylum tricornutum
28
short_name
[+] Show/hide bicluster #3 rows (long gene names).
bicluster 3 long names
Phaeodactylum tricornutum
28
long_name
[+] Show/hide bicluster #3 rows (NCBI RefSeq gene IDs).
bicluster 3 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #3 gene upstream sequences.
bicluster 3 upstream sequences
Phaeodactylum tricornutum
25
upstream
[+] Show/hide bicluster #3 columns (arrays; conditions).
bicluster 3 arrays
Phaeodactylum tricornutum
75
[+] Show/hide bicluster #3 ratios.
bicluster 3 ratios
Phaeodactylum tricornutum
28x75
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_2 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_4 GSE34988_Cadmium_5 GSE34988_Control_1 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Copper_3 GSE34988_Dispersant_1 GSE34988_Dispersant_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Oil_1 GSE34988_Oil_3 GSE34988_Oil_4 GSE34988_Oil_5 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_5 GSE34988_Silver_1 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_3 GSE42039_light_24h_3 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_2 GSE55959_BlueLight_24h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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6066 -0.470668466814019 -0.765590307561813 -0.458871593184107 -0.227037380978884 -0.453229610143714 -1.35592638030456 0.555033791778372 -1.07713035290131 -1.37693507351679 -1.14444946872418 -1.66434281866988 -1.69662521981191 -1.68271516707959 -0.518774065846602 -0.52994519226658 -1.79866304763515 -0.925745689776594 -1.13337066566304 -0.0663485749130116 -0.594217637247634 -1.22556579761855 -0.168453080717644 0.38672830860797 0.00952070975379494 -1.3717748450468 1.53094445139133 1.53330310804674 1.9782016806969 2.26840754169349 0.125821397870281 -0.504362004850581 -1.15563097741876 0.680725201630307 -0.034818753785481 0.39745777956973 0.796452531939742 1.1143045201603 -0.752555142778162 -0.0774077551571317 0.689790021909041 0.807073205977997 0.827726351677167 0.836753832286325 0.371515910775552 2.33627762280563 -0.297204334928883 -0.0254720702922 0.924005869027879 0.302553593037549 0.850302182614994 1.57803213410192 0.70275745314757 1.69591849744864 0.854184892761883 -0.231193115435491 0.109337793674593 0.0779884226389089 -0.408972492582036 -0.662412866301125 -0.0708594089280379 0.392638021490683 -0.0698253306129122 -0.242888414616062 -0.501269706141833 0.446962726214357 -0.257882293408087 0.191090872569674 -0.28767636938398 0.626751364337702 0.75892837160367 0.963465597103788 1.20645371427394 1.6041688646208
75556-77049_hypothetical -1.66639269695313 -1.96294580066844 0.423148927532 0.476712611363928 -0.606278121112877 -0.101630105710522 0.87534079985666 2.4630995080694 0.896590517551858 0.622665280480335 0.395717067994534 0.250668286042791 -0.951758302278417 0.048256146437292 1.09135309356011 1.56664709431249 0.221423072625598 0.947434170564196 0.161526599090623 -0.903846703000837 0.385930536594408 0.425344480614069 -1.22138868043019 -0.499492500910968 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.353689844808664 -0.219115467320107 -0.0227405848515811 0.723325539705776 -0.0157065962031459 -1.20718601788091 -0.42038682639067 -1.07851310438105 -1.04224450711934 -0.0808696137622073 -0.797432914686356 -0.289852406595256 0.202341664984179 -0.224847825074443 -0.284072891952013 -2.24915944758269 -0.697323846795596 -0.500147173197214 -2.5957964977628
c15951-15841_photosystem NA NA NA 0.525274766579918 NA -1.88421904308306 -0.0837788622438306 -0.653474917429078 -1.27783024997441 -0.941759497866975 -1.57380788555366 -0.810374656456095 -1.93393450757801 -0.394913504582757 -1.10033531003607 -0.960425405952882 -1.71458597140829 -2.35234988909027 0.687202725033178 -1.44417146576581 -1.37200385601507 1.36115294127188 -0.220203981161112 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.791707620695722 -1.07370357531222 -1.19357674421756 0.0828024839782923 0 -0.20843618717954 -0.0195726736341596 -0.196507363902223 0.0385078216601416 -0.046362277938901 -1.00475882937325 0.640557033931153 0.383938063693237 0.572853132355005 0.719060495599701 -0.878255453307571 0.861423622881681 0.845711321042881 -1.19801453551397
c33230-32490_Sec-independent -1.29930821725141 -1.73570688421218 -0.0424185195771038 0.948837206903693 0.0232207628799801 -1.17475767878909 0.604125848590696 1.67669480024968 0.902582025047219 1.99666066188325 -0.105319413219181 1.080279870024 0.710961472893012 1.32558617593159 0.63425581765918 -0.139713371612903 0.164658032368168 -0.457669030221227 1.11971984825662 -0.803695738217837 1.02471211496893 1.09590509609015 -1.7561678792906 -0.840556297772643 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.60629758750867 1.84071868962697 2.3193387169137 1.10718805362394 0.842851548790638 -0.877238714227396 0.155178652371355 -0.23047576542428 0.145564461729106 0.259006478806594 -0.154895810262417 0.278738071605778 -1.02304239972972 0.387397935079648 -0.335369930239485 -1.73606508407569 -1.87815116094584 -0.613199992961108 -1.41882267577282
[+] Show/hide bicluster #3 motif PSSM #1. bicluster 3 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 0.625 0.375 0
4 0 0 0 1
5 0 0 0 1
6 0 0 0 1
7 0 0.375 0 0.625
8 0 0 0.25 0.75
9 0 0 1 0
10 0 0.125 0.875 0
11 0.75 0.25 0 0 [+] Show/hide bicluster #3 motif PSSM #2. bicluster 3 motif PSSM #2 Phaeodactylum tricornutum 21x4
POSITION A C G T
1 0.375 0.625 0 0
2 0 0.125 0.875 0
3 1 0 0 0
4 0.625 0.125 0.25 0
5 0.125 0.875 0 0
6 0.5 0 0.5 0
7 0.375 0.375 0.125 0.125
8 0 0 0.75 0.25
9 0 0 0 1
10 0 0.375 0 0.625
11 0.125 0 0.875 0
12 0.875 0 0.125 0
13 0 0.375 0.375 0.25
14 0 0.625 0.375 0
15 0.25 0 0 0.75
16 0.125 0.375 0.375 0.125
17 0 0.5 0.5 0
18 0.75 0.125 0 0.125
19 0.25 0.75 0 0
20 0 0.125 0.875 0
21 0.875 0.125 0 0 |