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[+] Show/hide bicluster #12 rows and columns.
bicluster 12
Phaeodactylum tricornutum
42x56
[+] Show/hide bicluster #12 rows (genes).
bicluster 12 genes
Phaeodactylum tricornutum
42
[+] Show/hide bicluster #12 rows (short gene names).
bicluster 12 short names
Phaeodactylum tricornutum
42
short_name
[+] Show/hide bicluster #12 rows (long gene names).
bicluster 12 long names
Phaeodactylum tricornutum
42
long_name
[+] Show/hide bicluster #12 rows (NCBI RefSeq gene IDs).
bicluster 12 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #12 gene upstream sequences.
bicluster 12 upstream sequences
Phaeodactylum tricornutum
41
upstream
[+] Show/hide bicluster #12 columns (arrays; conditions).
bicluster 12 arrays
Phaeodactylum tricornutum
56
[+] Show/hide bicluster #12 ratios.
bicluster 12 ratios
Phaeodactylum tricornutum
42x56
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_3 GSE17237_highlight_30min_2 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_6hr_1 GSE34988_Cadmium_1 GSE34988_Control_4 GSE34988_Control_6 GSE34988_Copper_4 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_2 GSE34988_Oil_4 GSE34988_Salinity_15ppt_2 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_2 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2
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49591 0.313012798942105 0.250145910124279 -0.409695202703267 -0.548664114826883 -0.236593575321219 0.3803596066376 0.760151368827564 NA NA NA 0.279994621324765 0.024784104134835 0.0167906924168776 -0.137892047596259 -1.12501441682048 -0.265538749721943 -0.0651428878761649 -0.103620876287164 0.119008143777111 -0.483686906163753 0.262293686306651 -0.589764976595523 0.286620856130615 0.020725820071186 -0.889790054764513 0.240936689637595 0 -0.650364739119513 -0.489199949190762 0.0958011278190719 0.713901917301775 0.734001570197776 0.625301835640688 -0.174971023984084 0.317364331176664 -0.372985372305827 0.78820331257638 1.00765062081372 0.704864457415691 -0.0326073588278057 -0.0083712082455928 0.311324639825175 0.440884013030872 0.323670699948065 -0.0531675805670983 -0.099620660129134 0.545516199720765 0.31751283709769
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49984 -1.63027629362765 -2.22455289276922 -1.66550223997851 -2.00962500602008 -1.48920712819442 NA 0.699776176855323 -0.711752300427823 0.521909954787989 NA -0.0335287981515436 -2.21545953798179 -0.31737100969679 0.557349598598169 -0.873101522777323 1.63361839608886 0.671348113785654 -0.440474856493467 0.364330874186644 -1.29734833333638 -0.305457882402183 1.40685320217358 -0.0240671883441188 0.563739257813754 1.05449962089008 1.20786986870706 0.248234953562579 -0.537847161606629 -0.173991475324228 0.470697848846606 1.11449278996637 1.27275755029509 1.40162615979702 0.0230106075971392 -0.161296854482452 0.255170745284431 1.84455157171256 2.17001131167068 1.9140929522401 -0.261003827276893 -0.245185349274641 0.715281127189934 0.912207897649939 0.801122286492905 -0.176088724910325 -0.142752110511271 0.589256308470115 0.836655915053496
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53961 -1.94031894195783 -2.00552879188174 -0.513809414162926 -0.856777976195159 -0.389381970794603 0.556079781396761 0.732583458428642 -0.621983743044809 0.658945676009162 -0.046219541640975 0.477842060915081 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.622884394503676 0.561324373206146 1.20877614631954 -0.933555635322847 0.203230304497002 0.953849369579754 0.764178891963946 1.28673296904544 1.25135416568861 -0.927331282940473 -0.779408642029516 -0.603788641014807 0.0364312962651462 0 -1.22370545574101 -1.41589994142012 -0.142034643015207 0.281671214814523
c36146-35928_30S -1.01579624929537 -1.05173717086266 -0.477893917524239 -0.131003449812978 0.181157588069216 0.790012952642287 0.111529119567731 -0.430419594609063 0.212377730163229 0.46841035581354 0.10555646529829 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.22604682755972 1.10008499229627 1.40074951773216 0.715762084138578 -0.109572260835599 -0.877118807357252 1.94635537689279 1.64286145748819 1.03583680984995 -0.0515848468289926 -0.112581040047563 0.672823388817009 0.65203001647113 -0.0608037338700281 -0.314198417185326 -0.514069614275327 1.41406773420263 0.804096336626459
[+] Show/hide bicluster #12 motif PSSM #1. bicluster 12 motif PSSM #1 Phaeodactylum tricornutum 8x4
POSITION A C G T
1 1 0 0 0
2 0 0.5 0.5 0
3 0.586957 0 0.347826 0.065217
4 0.956522 0 0.043478 0
5 0.913043 0 0.021739 0.065217
6 0.782609 0 0 0.217391
7 0.673913 0.108696 0.217391 0
8 0 0 1 0 [+] Show/hide bicluster #12 motif PSSM #2. bicluster 12 motif PSSM #2 Phaeodactylum tricornutum 10x4
POSITION A C G T
1 0.071429 0 0 0.928571
2 1 0 0 0
3 0.928571 0 0 0.071429
4 0 0.928571 0 0.071429
5 0 0.357143 0 0.642857
6 0 0.071429 0.785714 0.142857
7 0 0 0 1
8 1 0 0 0
9 1 0 0 0
10 0.857143 0.071429 0 0.071429 |