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[+] Show/hide bicluster #20 rows and columns.
bicluster 20
Phaeodactylum tricornutum
38x52
[+] Show/hide bicluster #20 rows (genes).
bicluster 20 genes
Phaeodactylum tricornutum
38
[+] Show/hide bicluster #20 rows (short gene names).
bicluster 20 short names
Phaeodactylum tricornutum
38
short_name
[+] Show/hide bicluster #20 rows (long gene names).
bicluster 20 long names
Phaeodactylum tricornutum
38
long_name
[+] Show/hide bicluster #20 rows (NCBI RefSeq gene IDs).
bicluster 20 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #20 gene upstream sequences.
bicluster 20 upstream sequences
Phaeodactylum tricornutum
38
upstream
[+] Show/hide bicluster #20 columns (arrays; conditions).
bicluster 20 arrays
Phaeodactylum tricornutum
52
[+] Show/hide bicluster #20 ratios.
bicluster 20 ratios
Phaeodactylum tricornutum
38x52
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_3 GSE17237_highlight_30min_2 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_2 GSE34988_Control_2 GSE34988_Control_5 GSE34988_Copper_5 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_4 GSE34988_Oil_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_RedLight_24h_rep3
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49921 -0.0455408011480961 -0.0654476858849392 -0.131608802804447 -0.217969552765752 0.427177451758739 0.16049838336128 -0.42052503244618 -0.540999742383725 0.319940820171195 0.5774239324393 -0.57382268233512 0.373455210316708 0.595162284107199 -0.0235227068758161 -0.147192808474175 -0.563357987742324 0.546682136772424 0.00562998902671471 -0.209858876567918 0.230515972748451 -0.0401998605756742 0.00385827628513568 0.194863854628324 0.341794360621261 0.0889991440596987 -0.0976315889768477 0.211575874651302 0.983131815405887 1.24106658579685 -0.290200674880754 -0.162012701621532 -0.0661787153694075 0.188618131577556 0.0801042788760404 0.409156834942813 0.147304319156341 0.611192176010942 -0.185954426846583 0.188552282135535 -0.442550307992948 -0.519144363530371 -0.437889989958111 -0.179937196382066 0.210067979770405 0.320826683075652 -0.389602719649996 -0.282401776518134 -0.46629776103262 0.246324930263719 -0.308780366287683 -0.0741817009406202
49948 0.269454677165047 0.051078639533143 -0.705758860752771 0.462901943377784 0.125158970984054 0.126215950892226 0.0282917481543108 -1.47115590399317 0.501017037726834 0.194014231945507 0.154048425606298 -0.0867435632857212 0.207667221476356 -0.877759384733236 -0.203630362831662 -0.258416942013097 -0.881020805926497 -0.0370417737492964 -0.806355406181887 -0.592228567381957 -0.88441789946533 0.0897273069789627 -0.805223819446611 -0.51841268033826 1.06928754912813 -0.0287654615241672 1.29350615288906 0.0754014470266388 0.134048238588156 0.818237366874876 0.728672859074829 0.539489431113931 -0.185342125054836 -0.423560263977852 -0.216360973801493 -0.528653370972703 -0.614489382645097 -0.0973086955226772 -0.544408564558984 -0.326392181495824 -0.480845162823633 -0.536611147637052 -0.128940596148697 0.708449676764067 -1.15216422366513 -0.104223822894921 0.497368656235182 0.0521866427790689 0.53825934593395 0.387991264338244 0.707289761734389
50137 -0.241621934451134 -0.458410483473168 -0.490173243856198 -0.142016384900469 0.144514551385895 0.561504087478478 0.372950473802756 -0.445418589347566 0.492029987607676 0.235723013895493 -1.03437109340124 -0.119184202582416 -0.0424601755601079 -0.320419459141351 -0.14342533161085 0.641743552060954 -0.0601199295772448 -0.493108082826669 0.205410109424713 -0.514454508061951 0.0773616015754505 0.239239216228921 0.13548711540433 0.361498681917811 -0.570989091524152 -0.91093296409851 -1.02760738935217 -0.570807048642106 -0.618943234110917 0.560162257610495 0.529580543460621 -0.486037333074587 0.82229479850723 0.625481946452786 0.31758981063585 0.413247184605855 0.64636380691259 -0.129023412265655 -0.215451115157358 0.278613257509535 -0.530845526699439 -0.616001986958155 0.23880813903097 -0.504784238194739 0.282672620627177 -0.672561748798405 0.44680353406908 -0.74155875870996 -0.0695602726570316 0.386196389074806 -0.956456691147033
50338 -0.711204524565231 -0.550105151887625 -0.215039900894271 0.0020823817494231 0.345044450578189 0.887844796143408 0.40290619864173 -0.225199079304389 0.600155091118505 0.476025477974503 -0.559058095394168 -0.305609378498778 0.291133791954362 -0.274325952904404 -0.169461186562883 0.931280019792949 -0.699514138702007 0.343350464673421 -0.0315994317977868 -0.522847044748408 -0.530997847405117 -0.609298543612988 -0.509610434075582 -0.7646026384315 0 -0.3470236558189 -0.180851127189055 1.14323516461973 1.34257508022379 0.227427082277922 0.329011733164936 0.149129105402561 -0.288842961625169 0.019789920578306 -0.0808662354438326 0.680766948703607 0.101031955371695 0.185205373462236 -0.390121326583244 0.0514456695569626 -0.251307789670318 -0.228013326679534 -0.903449280124671 -0.370828713210944 1.87566906866312 -0.18416873904531 0.215463160362153 -0.0448474326857948 -0.0381476731747511 -0.198737699442549 0.283316175750033
52468 -0.335350330418656 -0.464529964632314 0.0343549236052111 -0.163872939869553 -0.0979494097251195 0.540519598662848 0.508716258629007 -0.892766167963609 0.742615992068399 0.097371721449403 -0.114645972712452 NA NA -0.3246346892302 -0.937946623090358 -0.802495397658409 -0.114210686120943 0.196176140459876 -0.427533058386044 -1.30323827771802 -0.776079831508318 -0.0258622878714503 -0.110279253710571 -0.740552048279055 0.219620363762909 0.58504288993503 0.357527163718443 -0.329649269538057 -0.132930472243159 -0.0177552921979697 0.0537965749435891 -0.0890921840073216 0.0421374908431609 -0.215708135176713 -0.106453106833963 -0.685205877301598 -0.552878508336241 -0.322415087620517 0.100756553501124 0.121666964693287 -0.030067149171428 -0.0508457061384164 -0.0466637340208422 0.121666964693287 -0.0847874131462546 -0.0136767384139256 0.203600045514802 0.00652903317462628 0.080607011751817 0.0537965749435891 -0.00151618137739273
[+] Show/hide bicluster #20 motif PSSM #1. bicluster 20 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0 0.333333 0 0.666667
2 0 0 1 0
3 0 0 0 1
4 0 0 1 0
5 0 0.833333 0 0.166667
6 0.166667 0.166667 0.166667 0.5
7 0 0 0.666667 0.333333
8 0.166667 0 0 0.833333
9 0 1 0 0
10 0 0 0 1
11 0.166667 0.166667 0 0.666667
12 0 1 0 0
13 0.666667 0 0.166667 0.166667
14 0 0.166667 0.833333 0
15 0.833333 0.166667 0 0
16 0.833333 0.166667 0 0
17 0 0 1 0
18 0 0.833333 0.166667 0
19 0.166667 0.666667 0.166667 0
20 0.833333 0.166667 0 0
21 0 0 1 0
22 0 0.166667 0.833333 0
23 0.666667 0.333333 0 0
24 0 0.166667 0.666667 0.166667 [+] Show/hide bicluster #20 motif PSSM #2. bicluster 20 motif PSSM #2 Phaeodactylum tricornutum 21x4
POSITION A C G T
1 0 0.166667 0 0.833333
2 0 0 0 1
3 0.666667 0.166667 0.166667 0
4 0 0 1 0
5 0.666667 0 0.333333 0
6 0.833333 0.166667 0 0
7 0.166667 0 0.833333 0
8 0 1 0 0
9 0 1 0 0
10 0.666667 0.166667 0.166667 0
11 0 0 1 0
12 1 0 0 0
13 0 1 0 0
14 0.666667 0.166667 0.166667 0
15 0.833333 0 0.166667 0
16 0 0 1 0
17 0 0.166667 0 0.833333
18 0.166667 0.833333 0 0
19 0 0.166667 0.166667 0.666667
20 0 0 0.166667 0.833333
21 0 0.166667 0.833333 0 |