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[+] Show/hide bicluster #27 rows and columns.
bicluster 27
Phaeodactylum tricornutum
26x54
[+] Show/hide bicluster #27 rows (genes).
bicluster 27 genes
Phaeodactylum tricornutum
26
[+] Show/hide bicluster #27 rows (short gene names).
bicluster 27 short names
Phaeodactylum tricornutum
26
short_name
[+] Show/hide bicluster #27 rows (long gene names).
bicluster 27 long names
Phaeodactylum tricornutum
26
long_name
[+] Show/hide bicluster #27 rows (NCBI RefSeq gene IDs).
bicluster 27 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #27 gene upstream sequences.
bicluster 27 upstream sequences
Phaeodactylum tricornutum
25
upstream
[+] Show/hide bicluster #27 columns (arrays; conditions).
bicluster 27 arrays
Phaeodactylum tricornutum
54
[+] Show/hide bicluster #27 ratios.
bicluster 27 ratios
Phaeodactylum tricornutum
26x54
GENES GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_2 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_1.2mg_2 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_4 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Copper_4 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_4 GSE34988_Salinity_15ppt_5 GSE34988_Silver_1 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Simazine_5 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_light_0.5hr_1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep2 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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48685 -0.103220355369609 0.158163932638754 -1.01361081775113 -1.83099971660914 -0.306843884978875 NA -0.110592156441556 -0.259718298126258 -1.19427388402168 NA -2.11423383120806 -1.53381336570807 -1.25121627061511 -1.8193983776355 1.72736462730573 -0.486113489060126 0.0242732840161389 -0.157981282185828 -0.00854354705581602 -0.821477936226078 -0.267158321321459 2.05336158300954 -1.09316791223301 -1.11411425567886 -0.903075683091354 1.72393566100712 0.431232339552792 1.36524881304982 0.0241867192935513 0.192052209447176 -0.0373288929515453 -0.505300219550104 -0.409377323917639 -0.550492786795716 -0.0362585578100835 0.0696109167950514 -0.0839220904281666 -1.11227081000177 -0.319003649293626 -0.29838345295704 0 -0.31071618959212 -0.137012027180132 -0.3569668384289 0.135675258875858 -0.0396056126491875 0.0909986363430186 0.951555436130049 0.956229253909891 1.02143324703238 0.630945020614199 0.861069125191013 0.797621746768027 0.965526663116937
49168 0.28573252508662 0.0633518800502082 0.114124131932159 NA NA NA 0.132098735222261 0.085039820526296 NA NA -0.841451858850095 -0.59622125288109 -0.415883883271126 -0.531754735608845 3.4351071084745 -0.214001185846116 0.107324253958565 0.0862931522472396 0.0632961683372484 0.32224245257501 -0.180850418235463 0.387187964702874 -0.218789642540526 -0.285032734077006 -0.462039895251699 -0.456586114828712 -0.840611847432429 0.234970084993045 -0.292565750220744 -0.311436030020792 -0.426415821295914 -0.520271083016389 0.0206333432442369 -0.00209857968295189 0.00625673574831523 0.0465438809261582 -0.0105589961758804 -1.28726184349028 0.00832944691939944 0.458832947323373 0.0206333432442369 0.0103957903041959 0.0103957903041959 -0.0084338941150102 0.00832944691939944 -0.0234525713836108 0.0226622866915206 0 0.0287126505139741 0.0523840991780145 0.0206333432442369 0.00417761742277374 0.0103957903041959 0.0426220374952829
49314 -0.0303224627051348 -0.239817718032519 -0.176054275952291 -0.919327349757425 -0.0882093095719121 1.13119909730844 0.843649724268934 -1.25541972367397 -0.247816085959955 0.612720690507094 -0.257992371379469 -0.317459301194343 0.0821199050749426 -0.849344425400781 0.0195625060215069 0 -0.283319884355772 -0.0731310611624244 0.00558993239572382 0.0264400594328514 -0.410009133176991 -0.324059578844209 -0.397163548664298 -0.985552697581432 -0.716406082114039 1.21574611393534 -0.388010960220598 0.533104483443024 -0.860226497007806 -0.200360284749254 -0.20971024573564 0.775518506024661 -0.103476079217226 -0.554177018717696 0.526031865047233 0.398458436834634 0.848017972675746 -1.8073178314918 -0.24389467929861 -0.313054094891207 0.420253402165175 -0.234924532486251 0.534988663388183 -0.306433737050363 0.333679481101377 0.402264774246728 0.506194548588924 -0.310403504553126 -0.396886709830404 -0.281460700852249 0.0508391935481953 -0.859737537935999 -0.676261121229733 -0.254192320508987
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51830 0.000526060645565407 -0.194391186013559 -0.513835624294586 -2.58646549500089 -0.656166435525735 -0.162020790095577 0.736024600726707 -0.456069061838077 0.356093984226369 -0.0568950291481846 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.211450971042697 -0.104860800621802 -0.676831881841308 -0.975877695537478 -0.31423766199547 -0.927395572791029 -0.0808315050214964 -0.11474039174636 -0.249312847365221 -0.143501906574046 -0.103599157197024 -0.232914470540232 0.441467446580994 0.0268993800384 0.454111398322494 1.53324641298221 1.50364710731319 1.83039381270345 0.473539414983682 -0.0716780065740148 0.0209064522624222 0.419675306092434
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[+] Show/hide bicluster #27 motif PSSM #1. bicluster 27 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0.058824 0.058824 0.294118 0.588235
2 0.058824 0 0.294118 0.647059
3 0.176471 0.294118 0 0.529412
4 0.176471 0.705882 0.058824 0.058824
5 0.647059 0.117647 0.235294 0
6 0.882353 0.058824 0.058824 0
7 0 0.294118 0.176471 0.529412
8 0.470588 0 0.235294 0.294118
9 0.529412 0.176471 0.294118 0
10 0.588235 0.176471 0.235294 0
11 0.529412 0.235294 0.058824 0.176471
12 0.176471 0 0 0.823529
13 0.176471 0.058824 0.529412 0.235294
14 0 0.176471 0.588235 0.235294
15 0.647059 0.117647 0.117647 0.117647
16 0.647059 0 0 0.352941
17 0.176471 0.117647 0.705882 0
18 0.941176 0 0.058824 0
19 0.529412 0.117647 0.176471 0.176471
20 0.941176 0 0.058824 0
21 0.117647 0.058824 0 0.823529
22 0 0.058824 0.294118 0.647059
23 0 0.058824 0.764706 0.176471
24 0.823529 0 0.117647 0.058824 [+] Show/hide bicluster #27 motif PSSM #2. bicluster 27 motif PSSM #2 Phaeodactylum tricornutum 16x4
POSITION A C G T
1 0 1 0 0
2 0 1 0 0
3 0.25 0.25 0.5 0
4 0 0.75 0.25 0
5 0 0 0.5 0.5
6 0 0 0 1
7 0 0 1 0
8 0.25 0 0.25 0.5
9 0 0 0 1
10 0 0.75 0.25 0
11 0 0 1 0
12 0 0 0 1
13 0 1 0 0
14 0 0 0 1
15 0 0.75 0.25 0
16 0 0 1 0 |