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[+] Show/hide bicluster #28 rows and columns.
bicluster 28
Phaeodactylum tricornutum
36x49
[+] Show/hide bicluster #28 rows (genes).
bicluster 28 genes
Phaeodactylum tricornutum
36
[+] Show/hide bicluster #28 rows (short gene names).
bicluster 28 short names
Phaeodactylum tricornutum
36
short_name
[+] Show/hide bicluster #28 rows (long gene names).
bicluster 28 long names
Phaeodactylum tricornutum
36
long_name
[+] Show/hide bicluster #28 rows (NCBI RefSeq gene IDs).
bicluster 28 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #28 gene upstream sequences.
bicluster 28 upstream sequences
Phaeodactylum tricornutum
36
upstream
[+] Show/hide bicluster #28 columns (arrays; conditions).
bicluster 28 arrays
Phaeodactylum tricornutum
49
[+] Show/hide bicluster #28 ratios.
bicluster 28 ratios
Phaeodactylum tricornutum
36x49
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Control_1 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_2 GSE34988_Mixture_5 GSE34988_Oil_1 GSE34988_Oil_4 GSE34988_Oil_5 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_4 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_10.5hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_24h_rep3
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49811 -0.358085185007288 0.25494025414044 NA NA -0.270686488717685 NA -0.34102831977915 -0.696384408833257 0.462176909541214 -0.158128206696394 -1.26592668425063 -1.46341553274397 0.323488176229868 -0.366731753441547 -0.501352139878388 -0.381308121915322 -0.959700185119069 -1.18386797167614 -1.27080617517579 -1.67674053827414 -1.92910047787739 -0.583614733077806 -1.8720823715949 -0.572459344552952 -0.246762827547176 2.01534006090621 1.6667238985125 1.832149348031 2.24169578144867 0.486560535051108 0.346603375154847 -0.0216125951209651 1.13209029393555 0.378080310024311 0.450187128673597 0.94470326524671 0.685924077039097 2.24933475487261 1.79916659202167 2.51027805028795 0.327198087662608 0.154375317571996 1.37882293998732 1.56810506690259 1.28940949369365 0.287826826146561 1.07776893263706 0.716638347293556 0.227312789880345
7629 0.403537422656708 0.681300800162471 -0.626586990808326 -1.63204159680405 -0.434822341163252 -0.311087878223474 -1.3563543784937 -0.540151447275335 0.104943076589991 -0.388566130970294 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.45216786359277 2.1663995947453 2.26062688338779 1.77301794819285 -0.285654915883047 -0.542431965980188 0.462287605277159 1.04562270284763 0.377648477767744 -0.20687532085546 0.789623743159762 1.24195306677239 1.64498516385101 2.01242579086711 2.20647782490451 -0.520014756301561 -0.620169160834261 1.00932446215932 1.31820415358405 0.969604116330633 -0.561151113979442 0.908953271833826 0.453133471434494 -1.33031311256005
[+] Show/hide bicluster #28 motif PSSM #1. bicluster 28 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0.025 0.025 0.95
2 0 0 0.95 0.05
3 1 0 0 0
4 0.15 0.65 0.075 0.125
5 0.3 0 0 0.7
6 0.075 0 0.925 0
7 0 0.325 0.05 0.625
8 0 0.15 0.8 0.05
9 0.925 0 0 0.075
10 0.4 0.075 0.375 0.15
11 0.775 0 0.025 0.2 [+] Show/hide bicluster #28 motif PSSM #2. bicluster 28 motif PSSM #2 Phaeodactylum tricornutum 19x4
POSITION A C G T
1 0 0 0.166667 0.833333
2 0.166667 0.041667 0.25 0.541667
3 0.208333 0.208333 0.125 0.458333
4 0 0.083333 0.375 0.541667
5 0.083333 0 0.708333 0.208333
6 0 0.083333 0 0.916667
7 0 0.083333 0 0.916667
8 0.125 0.125 0.75 0
9 0.25 0.375 0.125 0.25
10 0 0.041667 0.083333 0.875
11 0.125 0 0.083333 0.791667
12 0.041667 0.25 0.625 0.083333
13 0 0.375 0.625 0
14 0 0 0 1
15 0 0 0.166667 0.833333
16 0 0.333333 0 0.666667
17 0.041667 0.25 0.208333 0.5
18 0 0.208333 0.458333 0.333333
19 0 0.083333 0.125 0.791667 |