[+] Show/hide bicluster #38 rows and columns.
bicluster 38
Phaeodactylum tricornutum
29x56
[+] Show/hide bicluster #38 rows (genes).
bicluster 38 genes
Phaeodactylum tricornutum
29
[+] Show/hide bicluster #38 rows (short gene names).
bicluster 38 short names
Phaeodactylum tricornutum
29
short_name
[+] Show/hide bicluster #38 rows (long gene names).
bicluster 38 long names
Phaeodactylum tricornutum
29
long_name
[+] Show/hide bicluster #38 rows (NCBI RefSeq gene IDs).
bicluster 38 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #38 gene upstream sequences.
bicluster 38 upstream sequences
Phaeodactylum tricornutum
28
upstream
[+] Show/hide bicluster #38 columns (arrays; conditions).
bicluster 38 arrays
Phaeodactylum tricornutum
56
[+] Show/hide bicluster #38 ratios.
bicluster 38 ratios
Phaeodactylum tricornutum
29x56
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_2 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_5 GSE34988_Control_3 GSE34988_Copper_2 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_4 GSE34988_Mixture_4 GSE34988_Oil_2 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_4 GSE34988_Silver_4 GSE34988_Simazine_2 GSE34988_Simazine_4 GSE34988_Simazine_5 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3
14688 -0.0902114195989085 -0.293195803096431 -0.32872579411959 0.0284278547740728 0.533571640190282 -1.83147062639962 0.0104890712629237 0 -1.06096183433364 -0.106474886794205 0.143097038845771 0.218459239370327 -1.18642286698307 -0.456499880677365 -0.640838742798821 -0.559104315623373 -2.61445321485178 0.380884975151368 0.55431008993024 0.140662658514381 1.15160694716349 1.13695199990092 0.590114650544897 1.08870324530427 1.03677108109042 -2.51801771321672 1.2945062538853 0.576663150421751 0.0616774555365 1.21979425219647 -0.583615158040795 -1.06842358481223 -1.10808432348739 -0.751180138016155 1.0748648086276 0.733283117195713 1.45934223197669 0.297468873536684 -0.429664687832241 0.202368331043672 0.291349666917986 -0.362927787694898 0.492824122901319 -0.0588162198782432 -0.515624711189163 -0.650819412713203 -0.608555510638781 0.478510959685187 0.823160201260634 0.714093661239835 0.274052392449101 0.312229484528889 -0.219034142729312 -0.221378855881658 -0.346833815184517
33664 0.326658900514217 -0.107332503785641 0.431374691420991 -0.191010585006855 -0.00498050048398583 -0.947417891069741 -0.742023658485736 -1.99189053741806 -0.731937376774693 -0.0760525024071003 0.377794717775757 -0.167495625911131 -1.15943782031089 -0.438853715403587 -0.59199405918883 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.291828868594194 1.18969783657857 1.27221704727263 1.51241238153651 1.31356265557913 1.29836802253319 0.588659303401054 1.12020958089193 -0.0624521647229108 1.19187289086345 1.14627133811533 -0.080416770510647 -0.410182838976027 -0.371506904517308 0.900312913894284 1.19148706754049 0.920145087039609 0.995515409458982 0.415527071765981 -0.920116194613549 -0.817690271915614 -1.26282952256068
33726 0.889373493864986 0.871316174256078 0.861225319180513 0.0948514310730703 1.1565156045497 -1.49750143278027 -0.876138443085068 -1.73276175240256 -1.21264721594976 0.5521105623578 -0.299849709719507 NA -0.681236232788693 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.991601452934934 1.60741779790243 2.11835989061884 0.944479898606519 -0.317613675801296 0.31162305536213 0.105996414223188 1.06902455263309 0.0767103224819897 1.04861341796403 0.384222882222188 -0.869856160045487 -0.743543827054377 -0.801896241769776 0.647749936222624 1.08860080529084 0.999450779961419 1.33642552231008 1.50842059017169 -0.987646808546424 -1.07709746305843 -0.903130844087538
34981 0.521937039037372 0.758394019969295 0.432090351142768 0.14862056840553 0.373585531118375 -1.46086444261434 -1.19186879878353 -1.87354281686141 -0.562296573205168 0.730022664687227 0.0657909764840898 0.214842452785522 -0.476639248315882 1.21820940268323 0.373009769397501 0.679087486158451 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.00751504083248 1.32637856367835 1.45361670885712 1.11559173052895 1.4367113875507 0.973463411443453 -0.76013241494859 0.742249595082153 0 1.32169882616574 0.79844927533185 -0.122406094585897 -0.4044617697663 -0.453003706675785 1.25394784801731 0.924737218021983 1.06757352823638 0.068092037013571 -0.0450489928196108 -1.72448238052215 -1.46135450398227 -1.99802039416713
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3639 0.381328592334022 0.115653426133859 0.361510661017469 -0.00756240770383843 0.54360585601304 -2.57588875790218 -0.126070764812864 -1.20845149706004 -1.70637558530645 0.439153869318972 0 -0.308958677061098 -1.02017253306092 -0.198340154347227 0.261349687278028 -0.0507626258099638 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.31203017396426 1.84592767181448 1.67265467123735 0.408075480153528 0.306797967976405 0.415346303104151 -0.036682382419843 1.55239796971379 0.206926243138916 1.38651117486157 0.764296528991056 -1.10503595140005 -0.976778264052284 -0.902548347466896 0.612653217574901 1.23465429553952 1.02476407725607 1.11304266078878 1.28722246073421 -0.121917742787754 -0.381403167105348 -0.269737521073274
37171 1.14490476546067 1.01413948334939 0.735844139368981 0.653696718555485 0.949315668285683 -1.79753761243987 -0.739657656679462 -0.829650994419634 -2.05749228736519 -0.305986333903237 0.00838681611608313 0.169887527783431 -0.63253630228668 0.992971154775141 0.496448672686713 0.786775540273348 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.881245960008614 1.40754294717729 1.73140995583587 0.108685464059403 0.284898390996776 -1.04538253811971 -0.992586739522601 0.653737155327544 0.616967449277194 0.10136163441677 -0.815920067444848 -0.0920430207546863 -0.137684379010163 0.402558905492334 1.11593717887301 0.635860755495137 0.843295206965241 0.481763683410226 0.202361249904497 -0.473953807193995 0.572231812521999
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38665 0.404534241943942 0.31649176002019 0.519528504048434 -0.136897075464707 0.347636039340157 -1.82272493648552 -0.753781398810459 -0.94781025897385 -0.66684693451636 0.501219261378984 -0.0152427290133298 -0.661474546333666 -0.796790450694435 0.100039018746423 0.181589116288859 0.107992788541984 0.717190852685109 0.276860449370577 -0.548424257039337 -0.86851264228538 0.338192974463939 0.38614023213261 0.734532071260449 0.557886905677962 0.553060309011782 -3.25377160102547 -0.150403601543787 -0.237330878696504 0.0382443416958042 0.346281903244607 -0.0547373953352839 0.0230519346507141 0.114223009164268 -0.576531927897493 1.29378608257615 1.74308931000128 1.22818448722099 1.82328170793175 2.27017960115424 0.535627814136597 1.70563534737502 0.391936508414188 2.6695559868177 1.973888154582 0.217797567870179 -0.309615771322494 -0.392993160613905 1.11733837968897 1.0054867084681 1.15597662604798 0.583464074335327 0.732742533171126 0.122951149504322 0.201570761278723 -0.416145651279705
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[+] Show/hide bicluster #38 motif PSSM #1. bicluster 38 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0.4 0.1 0.5
2 0 0 0 1
3 0 0.55 0.15 0.3
4 0.95 0.05 0 0
5 0 0.95 0 0.05
6 0.9 0 0 0.1
7 0.15 0 0.85 0
8 0 0.05 0 0.95
9 0 0.6 0.1 0.3
10 0.95 0 0.05 0
11 0 0.2 0.65 0.15 [+] Show/hide bicluster #38 motif PSSM #2. bicluster 38 motif PSSM #2 Phaeodactylum tricornutum 20x4
POSITION A C G T
1 0.166667 0.833333 0 0
2 0 0 1 0
3 0.166667 0.5 0 0.333333
4 0.833333 0 0 0.166667
5 0 0 0 1
6 0 1 0 0
7 0 0.166667 0 0.833333
8 0.166667 0.166667 0.666667 0
9 0.666667 0.333333 0 0
10 0 0.833333 0.166667 0
11 1 0 0 0
12 0 0.833333 0 0.166667
13 0 0 0.833333 0.166667
14 0.5 0 0.5 0
15 0.166667 0.333333 0.166667 0.333333
16 0.666667 0 0.333333 0
17 0.166667 0.833333 0 0
18 0.333333 0 0.666667 0
19 1 0 0 0
20 0.166667 0 0 0.833333 |