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[+] Show/hide bicluster #46 rows and columns.
bicluster 46
Phaeodactylum tricornutum
49x62
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bicluster 46 genes
Phaeodactylum tricornutum
49
[+] Show/hide bicluster #46 rows (short gene names).
bicluster 46 short names
Phaeodactylum tricornutum
49
short_name
[+] Show/hide bicluster #46 rows (long gene names).
bicluster 46 long names
Phaeodactylum tricornutum
49
long_name
[+] Show/hide bicluster #46 rows (NCBI RefSeq gene IDs).
bicluster 46 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #46 gene upstream sequences.
bicluster 46 upstream sequences
Phaeodactylum tricornutum
49
upstream
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bicluster 46 arrays
Phaeodactylum tricornutum
62
[+] Show/hide bicluster #46 ratios.
bicluster 46 ratios
Phaeodactylum tricornutum
49x62
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Cadmium_3 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Dispersant_3 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_3 GSE34988_Salinity_15ppt_4 GSE34988_Salinity_15ppt_5 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE42039_light_24h_1 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_7.5hr_1 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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17504 0.404015504075217 0.3056530743782 0 0.00578602527629515 -0.1298082192421 0.939492856645411 -0.442990673468974 -0.1129004471195 0.0602526484315413 0.0946392482148797 0.238069783487909 0.376320568307072 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.70407947115364 -1.59215758978455 -0.88362196730801 -1.57892452351135 0.00350995806704395 -0.0175650509045299 -0.657885757322144 -0.719727711885814 0.112027600731045 -1.19609432210043 -1.39616988234004 -1.55535478260321 -1.60258185748735 0.0975948732005439 -1.9551136245617 -0.436004916627703 -1.94238119202901 -1.61951378466646 -1.91665843545514 -1.2886248409707 -1.34527298542095 -1.52263664248621 -1.83260209590649 -1.60637543916643 -1.91079068063926 -1.40670236927166 -2.01723776069735
19661 0.568097518490382 1.00234692709822 0.622646844342319 0.137525592524245 0.115154239787214 0.494679642117636 -1.42016718200425 0.0373295133821603 0.721344349307909 -0.152214071108983 -0.021286495357728 0.166347862728597 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.4898727378225 -0.690524757547628 -0.274689812139253 -1.07782616131414 0.907370319903515 0.115140260648917 -1.64020296889767 -1.32074645134051 0.29264829523191 -1.46548846051939 -0.762202501150368 -1.47074532569654 -0.930709055970566 0.320790906361019 -1.27322064055177 -0.203607483115224 -1.4797162343652 -1.4199501528432 -1.32620070385973 -1.10249187877541 -0.928118146229395 -0.922267925285745 -1.2739650820992 -1.49146049204162 -0.550742010531425 -1.24281450744993 -1.37839919628531
20504 0.300933732835132 0.381097569111861 0.910617284517915 0.792563510001013 0.751855311891736 0.676987455619031 -0.881116478463647 0.585972535996288 0.596584850103391 0.4890463162981 0.67610988080979 0.597420933864558 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.56222384472412 -0.55086173437079 -0.441076019766949 -0.726003717581549 -0.589201952801489 -1.41571506427743 -0.866934787039229 -1.17525122729449 0.89640191332739 -1.3256641104922 -0.989813588628634 -1.48143561017672 -1.14064011267508 0.0728408009068865 -1.54920143595197 0.0241521519353354 -1.60330348999455 -1.67810117463782 -1.47822057817301 -2.00686052673794 -1.96695443020181 -1.90321048058432 -1.48801387689903 -1.83462329029296 -1.48076543437575 -1.41577392469422 -1.82930029533583
21873 0.00744492002426956 -0.191265368046183 -0.269859162941565 0 -0.462045552021678 0.916118131959633 -0.389972586046522 0.456365922312441 -0.0252789573112724 0.344529408232404 0.152484242377493 0.339101524272441 0.0762826448350436 -0.26749786584432 0.0533649398491593 0.345176071171481 -0.129539153645395 0.504171318244839 0.239072308223847 0.951549211192062 0.709571488646295 0.435220521472603 0.388568426799698 0.499210100292418 0.42148610231113 0.572592220915553 0.925652617175436 -0.517619532678409 -0.244102857057952 -0.0109043377083097 0.249425435054644 0.259072593122794 0.352822057762633 0.682357205186776 -0.434750395134376 -0.906235140930982 -0.784619392600358 -0.713260450026953 0.229811603808664 0.263668459365125 -0.39721894752036 -0.104109377396748 0.168966592680916 -0.862918525744823 -1.45437832221635 -1.07031390669608 -1.44016843075056 -1.74933762835744 -1.08429493459403 -0.0798435354347305 -0.499278114086813 -0.960472646813993 -1.18912155940892 -2.57352366599194 -2.60953401166743 -2.54296209227531 -1.14745934178776 -1.27946416632981 -1.94358193249045 -2.09235967675158 -2.17801489185853
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27082 0.40499019574469 0.858931553350696 0.818536771748752 0.25860910597923 0.237411844346526 1.32217570917513 -0.509195705190554 0.437893945075304 0.6230940200119 0.808226103731938 0.168380762123798 1.08256266357572 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.24726623950332 -1.20027758257215 -0.83876407606057 -1.43640882415029 0.868702628762711 0.824729042837442 -0.90244645788234 -1.03911010577391 0.801181528170146 -1.52433687910526 -0.879839150187129 -1.56280876960034 -1.75076247138347 -0.105675897660874 -1.93809777510045 -0.00412420290768167 -1.21060177009742 -1.63515773546961 -1.55780498032332 -1.28877831935244 -1.03797670997527 -1.19233837669714 -1.80399043002129 -1.79420640139075 -1.90557954161047 -1.97946073997116 -2.67981504781379
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[+] Show/hide bicluster #46 motif PSSM #1. bicluster 46 motif PSSM #1 Phaeodactylum tricornutum 13x4
POSITION A C G T
1 0.869565 0 0.130435 0
2 0.043478 0.565217 0.043478 0.347826
3 0 0 0.043478 0.956522
4 0.347826 0 0.652174 0
5 1 0 0 0
6 0 1 0 0
7 0.347826 0 0 0.652174
8 0 0.043478 0.956522 0
9 0 0 0 1
10 0.304348 0.043478 0.608696 0.043478
11 0.924671 0.010111 0.010111 0.055106
12 0.315976 0.227502 0.357937 0.098585
13 0.620324 0.053589 0.010111 0.315976 [+] Show/hide bicluster #46 motif PSSM #2. bicluster 46 motif PSSM #2 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0.125 0 0.875 0
2 0.875 0 0.125 0
3 0.125 0.875 0 0
4 0 0 1 0
5 1 0 0 0
6 0.125 0.625 0 0.25
7 0 0.125 0.875 0
8 0.625 0.375 0 0
9 0.125 0.25 0.25 0.375
10 0 0 1 0
11 1 0 0 0
12 0 1 0 0
13 0 0 0.875 0.125
14 1 0 0 0 |