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[+] Show/hide bicluster #60 rows and columns.
bicluster 60
Phaeodactylum tricornutum
39x64
[+] Show/hide bicluster #60 rows (genes).
bicluster 60 genes
Phaeodactylum tricornutum
39
[+] Show/hide bicluster #60 rows (short gene names).
bicluster 60 short names
Phaeodactylum tricornutum
39
short_name
[+] Show/hide bicluster #60 rows (long gene names).
bicluster 60 long names
Phaeodactylum tricornutum
39
long_name
[+] Show/hide bicluster #60 rows (NCBI RefSeq gene IDs).
bicluster 60 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #60 gene upstream sequences.
bicluster 60 upstream sequences
Phaeodactylum tricornutum
39
upstream
[+] Show/hide bicluster #60 columns (arrays; conditions).
bicluster 60 arrays
Phaeodactylum tricornutum
64
[+] Show/hide bicluster #60 ratios.
bicluster 60 ratios
Phaeodactylum tricornutum
39x64
GENES GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Cadmium_4 GSE34988_Control_1 GSE34988_Control_3 GSE34988_Control_5 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_3 GSE34988_Salinity_15ppt_3 GSE34988_Salinity_15ppt_5 GSE34988_Silver_3 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1
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11940 0.196936147851593 0.06693112256489 0.359609102569315 0.596271583986104 0.941798273500667 1.24675672820141 1.91183576987069 1.04976911373237 1.76875023896283 0.597364959583387 1.6559992139552 0.444699058350555 -0.883438946902781 0.168415045381003 -0.180078425479847 -0.0182921717038244 0.51318837244134 -0.482583452011071 -0.0776344655539243 -0.506411039722593 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.812711559450226 -0.785890040946867 -0.887679073574168 -1.42853955880994 -1.67751337995476 2.09715215699169 1.78497529816782 1.15325390216055 0.427111985173326 1.62317455806096 0.736655855895357 -0.210337843982614 -0.0810237133236765 2.15952285094577 1.04402250895854 -1.2404656759848 -1.51303569512743 -1.94509912637562 -2.34045684341549 -2.45044970098672 -1.50527722181988 -1.55760141984573 -1.59599569183901 0.0491308126093765
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[+] Show/hide bicluster #60 motif PSSM #1. bicluster 60 motif PSSM #1 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0.4 0.4 0.2 0
2 0.1 0 0 0.9
3 0 0 0.2 0.8
4 0 1 0 0
5 0 0.7 0 0.3
6 0.95 0 0 0.05
7 0.05 0.95 0 0
8 0.1 0 0.65 0.25
9 0 0.05 0 0.95
10 0 0 0.95 0.05
11 0 0 0.8 0.2
12 0.55 0 0.05 0.4
13 0.4 0.15 0.35 0.1
14 0.2 0.3 0.2 0.3
15 0.2 0.6 0 0.2 [+] Show/hide bicluster #60 motif PSSM #2. bicluster 60 motif PSSM #2 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0 0.875 0.125 0
2 0 0.875 0 0.125
3 0.875 0 0 0.125
4 0 0.25 0.75 0
5 0 0.375 0.125 0.5
6 0 0 0.875 0.125
7 0.125 0 0.875 0
8 0.125 0 0 0.875
9 0.625 0 0.125 0.25
10 0 0.125 0.875 0
11 0.125 0.125 0 0.75
12 0.375 0 0.625 0
13 0.125 0 0.875 0
14 0.625 0.375 0 0
15 0.25 0.125 0 0.625
16 0.375 0.625 0 0
17 0 0 0.5 0.5
18 0.125 0.375 0.5 0
19 0 0.125 0.875 0
20 0 0.125 0.125 0.75
21 0 0.125 0.875 0
22 0.625 0 0.375 0
23 0.375 0.125 0.125 0.375
24 0.125 0 0.875 0 |