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[+] Show/hide bicluster #83 rows and columns.
bicluster 83
Phaeodactylum tricornutum
33x63
[+] Show/hide bicluster #83 rows (genes).
bicluster 83 genes
Phaeodactylum tricornutum
33
[+] Show/hide bicluster #83 rows (short gene names).
bicluster 83 short names
Phaeodactylum tricornutum
33
short_name
[+] Show/hide bicluster #83 rows (long gene names).
bicluster 83 long names
Phaeodactylum tricornutum
33
long_name
[+] Show/hide bicluster #83 rows (NCBI RefSeq gene IDs).
bicluster 83 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #83 gene upstream sequences.
bicluster 83 upstream sequences
Phaeodactylum tricornutum
33
upstream
[+] Show/hide bicluster #83 columns (arrays; conditions).
bicluster 83 arrays
Phaeodactylum tricornutum
63
[+] Show/hide bicluster #83 ratios.
bicluster 83 ratios
Phaeodactylum tricornutum
33x63
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_6 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_2 GSE34988_Mixture_2 GSE34988_Mixture_4 GSE34988_Simazine_1 GSE34988_Simazine_3 GSE34988_Simazine_5 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_2 GSE42514_dark_8hr_light_3hr_1 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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54092 -0.0412759979116405 0.200804908456767 0.479883085421102 1.21226004334242 0.640154348129801 0.279156905963252 1.10777701064096 0.640140645436988 0.406021003593111 0.463718475465672 0.161473612518308 0.558550244862292 -0.924122225615869 0.578469392648568 -0.472093227526256 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.2289155861396 1.94586849849775 2.25888312301559 1.15764096078409 0.441851478630675 -0.424540472237715 -2.08362025054844 0.0185574184459863 0.700228903714496 -1.25918456876771 -1.35999529980777 -0.339932576325923 -0.10936971930889 -0.329625355785977 -0.70391458680263 0 -3.26924865131477 -1.26856460365236 1.68729305518228 2.05256386226539 0.657966428118729 -0.999471985380034 -1.08472435208856 1.43541864072974 0.796641763583547 -0.380665344307552 -0.421703812210479 -0.718106411552135 1.1728942367192 0.737901042697927 -0.941557139589443 -0.964406677730877
6934 0.421635400332317 0.111017217986643 -0.0274511283602229 NA NA NA NA NA NA NA NA NA 0.227605070685546 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.36474945028312 1.99547182814088 2.33035965889778 0.493555580730868 0.0487885950821312 0.0808312515861642 -0.0433649375161138 0.338119722849003 0.147381129596648 -1.75543977084279 -1.27387662622287 -1.221163836182 -1.04787041970388 -1.19888396735639 -0.985649844546145 -0.392845031458147 -1.27387662622287 -0.878457117890446 2.86262709744495 2.00720057410446 0.626894391830604 -0.0413417285709667 -0.267160178648357 1.51188951999877 0.869365491770455 -0.195644417192222 0.338850842497409 -0.687832784869735 0.317050760775854 0.86341276142868 -0.378116705239145 -0.966385039993704
7634 0.129780788912837 0.0774751313520347 -0.0699977642707832 0.246956358861027 0.271525488565282 0.443425852736461 0.941208625198089 1.5369664324783 0.56291522156425 0.396111026667919 0.825787474180588 0.0539521147989957 -0.887578779994094 0.328673051787789 -0.14300411227874 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.23317101953112 2.4738467487442 2.3022239899405 0.0256534649640959 0 -0.490713508856095 -0.973477335045951 0.330850789553604 0.356014181159098 -2.24809822162079 -2.27735802787231 -1.7297828042076 -2.02789286683358 -1.03616770142396 -0.715075315437394 -0.465940643124599 -2.05921856610002 -1.22133517926689 1.94339779655766 1.81261317587261 0.191910235937495 -0.446452420592664 -0.371208979456691 1.56891045373809 -0.031061938494027 -0.726224720134778 -0.548099579614687 -0.283416677867296 0.929800301470284 0.00349124397559099 -0.295180223521273 -0.168047550573363
9283 0.260777516619642 0.121205032761087 -0.19247333302412 1.12383548169171 0.812754315219538 0.692757951390835 1.50972462172889 0.516803093775955 0.264439495706446 0.685077867549649 0.861493170472105 0.405580371393927 -1.15486877597644 0.911282416582575 -0.462902214958001 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.42423666908996 1.2556298938448 1.45596149210238 0.709114108775397 0.345698829143837 -0.764996783547457 -1.71006812673043 0.490104057505149 1.05228416502703 -2.73626513906088 -1.41584391132907 -0.853731593618609 -0.296520802817428 -0.33708008054091 -0.398049059551117 -0.320602196263167 -3.18171650570001 -0.529191405870501 1.26587262857173 1.19629850467801 0.378532065408165 -0.760374810181141 -0.299846482263375 1.04678785805517 0.370455954952742 -0.366100238035987 -0.43290259988529 -0.493993067348915 0.963776684287253 0.332094718516193 -0.578528014392186 -0.578528014392186
[+] Show/hide bicluster #83 motif PSSM #1. bicluster 83 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0.076923 0.538462 0 0.384615
2 0.384615 0.153846 0.461538 0
3 0.384615 0.153846 0.230769 0.230769
4 0.384615 0.538462 0 0.076923
5 0.846154 0 0.153846 0
6 0.923077 0 0 0.076923
7 0 0.769231 0 0.230769
8 0.923077 0 0.076923 0
9 0.615385 0.307692 0.076923 0
10 0.769231 0.230769 0 0
11 0.769231 0 0.230769 0
12 0.538462 0.076923 0.230769 0.153846
13 0.076923 0.538462 0 0.384615
14 0.615385 0.230769 0.153846 0
15 0.230769 0.769231 0 0
16 0.769231 0 0.230769 0
17 0.384615 0.384615 0.076923 0.153846
18 0.307692 0.615385 0 0.076923
19 0.076923 0.538462 0.153846 0.230769
20 0.615385 0 0.384615 0
21 0.538462 0.384615 0.076923 0
22 1 0 0 0
23 0.846154 0 0 0.153846
24 0.692308 0.153846 0 0.153846 [+] Show/hide bicluster #83 motif PSSM #2. bicluster 83 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0 1 0 0
2 0.25 0.25 0.5 0
3 0.25 0.25 0.125 0.375
4 0.125 0 0 0.875
5 0.25 0 0.75 0
6 0 0.25 0.5 0.25
7 0 0.875 0.125 0
8 0 0 1 0
9 0 0 1 0
10 1 0 0 0
11 0.5 0 0.5 0
12 1 0 0 0
13 0.75 0.125 0 0.125
14 0 0 1 0
15 0.875 0 0.125 0 |