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[+] Show/hide bicluster #89 rows and columns.
bicluster 89
Phaeodactylum tricornutum
24x64
[+] Show/hide bicluster #89 rows (genes).
bicluster 89 genes
Phaeodactylum tricornutum
24
[+] Show/hide bicluster #89 rows (short gene names).
bicluster 89 short names
Phaeodactylum tricornutum
24
short_name
[+] Show/hide bicluster #89 rows (long gene names).
bicluster 89 long names
Phaeodactylum tricornutum
24
long_name
[+] Show/hide bicluster #89 rows (NCBI RefSeq gene IDs).
bicluster 89 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #89 gene upstream sequences.
bicluster 89 upstream sequences
Phaeodactylum tricornutum
24
upstream
[+] Show/hide bicluster #89 columns (arrays; conditions).
bicluster 89 arrays
Phaeodactylum tricornutum
64
[+] Show/hide bicluster #89 ratios.
bicluster 89 ratios
Phaeodactylum tricornutum
24x64
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_2 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Control_1 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Copper_3 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_5 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Oil_3 GSE34988_Salinity_15ppt_4 GSE34988_Silver_1 GSE34988_Simazine_3 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep2 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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39115 -0.303003875705929 -0.132089567742957 -0.136848852321779 -0.209077994753305 0.0434440458406359 0.636767256807328 1.0786052392093 0.496693112915119 -0.18361582225661 1.0418943576316 0.546364646232614 0.302146157439135 0.509753149715238 0.110507964714559 0.379427140472122 -2.65421029362987 -1.83177643884092 -3.43923793536416 -2.1438211159231 -2.6856908614344 0.160492818533352 0.283646933064001 0.160747468254111 0.0958524897425565 0.0948056543040739 -0.693236781442885 -0.458101275284917 -0.524293069257667 0.190705974856647 -2.20309831330603 -3.2059365454997 0.124877132324616 -0.596601042239293 0.477057872507234 -0.718570565239118 -2.13105608437284 -2.30725520094498 0.213682376717596 0.205100558218707 0.599841281151854 0.244559018283757 0.39100312254078 -0.7803286991354 -0.212896343380812 -0.238977455627474 -0.0777732432041008 0.0197455306532959 -0.0209652604706557 0.210475420717312 -0.183329231327932 -2.2257669086679 -1.92618939054757 -2.01391518123559 -2.09958206303256 0.101415754596842 -0.0295397232287605 0.072938646346256 0.469502448008689 -1.87349927649435 -0.122245386931922 -0.0449135202331878 0.720229468872796 0.618651353650903 0.648881019807327
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[+] Show/hide bicluster #89 motif PSSM #1. bicluster 89 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0.1 0.1 0.7 0.1
2 0.45 0 0.15 0.4
3 0.4 0.1 0.2 0.3
4 0 0.1 0.5 0.4
5 0.2 0.15 0 0.65
6 0.05 0.5 0.45 0
7 0.2 0.05 0 0.75
8 0.05 0.2 0.05 0.7
9 0 0.1 0 0.9
10 0.1 0 0.4 0.5
11 0.05 0.05 0 0.9
12 0 0.1 0.4 0.5
13 0.1 0.1 0.1 0.7
14 0 0.65 0.25 0.1
15 0.25 0.75 0 0
16 0 0 0 1
17 0.15 0.25 0.25 0.35
18 0.25 0.1 0.05 0.6
19 0 0.9 0.1 0
20 0.4 0.05 0 0.55
21 0.35 0.1 0.1 0.45
22 0 0.1 0.25 0.65
23 0.35 0.25 0.25 0.15
24 0.6 0.1 0.25 0.05 [+] Show/hide bicluster #89 motif PSSM #2. bicluster 89 motif PSSM #2 Phaeodactylum tricornutum 22x4
POSITION A C G T
1 0 0 1 0
2 0 0.666667 0.333333 0
3 0 0.833333 0 0.166667
4 0 0.833333 0.166667 0
5 0 1 0 0
6 0 0 0 1
7 0 0.333333 0 0.666667
8 0 0.666667 0.333333 0
9 0 1 0 0
10 0.666667 0 0.333333 0
11 0 0.833333 0 0.166667
12 0.833333 0 0.166667 0
13 0.333333 0.333333 0 0.333333
14 0.166667 0.333333 0.166667 0.333333
15 1 0 0 0
16 0 0.333333 0.666667 0
17 0.5 0.166667 0.166667 0.166667
18 0.333333 0 0 0.666667
19 0 0.5 0.5 0
20 0.166667 0.833333 0 0
21 0.833333 0.166667 0 0
22 0.166667 0 0 0.833333 |