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[+] Show/hide bicluster #112 rows and columns.
bicluster 112
Phaeodactylum tricornutum
28x73
[+] Show/hide bicluster #112 rows (genes).
bicluster 112 genes
Phaeodactylum tricornutum
28
[+] Show/hide bicluster #112 rows (short gene names).
bicluster 112 short names
Phaeodactylum tricornutum
28
short_name
[+] Show/hide bicluster #112 rows (long gene names).
bicluster 112 long names
Phaeodactylum tricornutum
28
long_name
[+] Show/hide bicluster #112 rows (NCBI RefSeq gene IDs).
bicluster 112 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #112 gene upstream sequences.
bicluster 112 upstream sequences
Phaeodactylum tricornutum
28
upstream
[+] Show/hide bicluster #112 columns (arrays; conditions).
bicluster 112 arrays
Phaeodactylum tricornutum
73
[+] Show/hide bicluster #112 ratios.
bicluster 112 ratios
Phaeodactylum tricornutum
28x73
GENES GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_2 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Copper_1 GSE34988_Copper_3 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_5 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Oil_4 GSE34988_Salinity_15ppt_2 GSE34988_Silver_1 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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[+] Show/hide bicluster #112 motif PSSM #1. bicluster 112 motif PSSM #1 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0 1 0 0
2 0.4 0 0 0.6
3 0.2 0 0.8 0
4 0 0 1 0
5 0.2 0 0.8 0
6 0 0.4 0 0.6
7 0 0 0 1
8 0 0 0.6 0.4
9 0.2 0 0.2 0.6
10 0 0.2 0.8 0
11 0.4 0 0 0.6
12 1 0 0 0
13 0 0 1 0
14 0 0 1 0
15 0 0 0 1
16 0.2 0.2 0 0.6
17 0 0.2 0.8 0
18 0 0.8 0.2 0
19 0 1 0 0
20 0.4 0.2 0.4 0
21 1 0 0 0
22 0 0 0.2 0.8
23 0 0 0 1
24 0 0.6 0 0.4 [+] Show/hide bicluster #112 motif PSSM #2. bicluster 112 motif PSSM #2 Phaeodactylum tricornutum 22x4
POSITION A C G T
1 0.857143 0 0.142857 0
2 1 0 0 0
3 0 1 0 0
4 0.142857 0 0.714286 0.142857
5 0.428571 0 0.571429 0
6 0 0 0 1
7 0.571429 0.285714 0.142857 0
8 0.142857 0 0.714286 0.142857
9 0.857143 0 0 0.142857
10 0 0.142857 0.714286 0.142857
11 0 0.428571 0 0.571429
12 0 0 0.571429 0.428571
13 1 0 0 0
14 0.285714 0.714286 0 0
15 0 0 1 0
16 0 0 1 0
17 0 0.571429 0.428571 0
18 0 0.714286 0.285714 0
19 0.142857 0 0.857143 0
20 0.038206 0.033222 0.604651 0.323921
21 0.609635 0.033222 0.318937 0.038206
22 0.752492 0.176079 0.033222 0.038206 |