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[+] Show/hide bicluster #117 rows and columns.
bicluster 117
Phaeodactylum tricornutum
29x75
[+] Show/hide bicluster #117 rows (genes).
bicluster 117 genes
Phaeodactylum tricornutum
29
[+] Show/hide bicluster #117 rows (short gene names).
bicluster 117 short names
Phaeodactylum tricornutum
29
short_name
[+] Show/hide bicluster #117 rows (long gene names).
bicluster 117 long names
Phaeodactylum tricornutum
29
long_name
[+] Show/hide bicluster #117 rows (NCBI RefSeq gene IDs).
bicluster 117 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #117 gene upstream sequences.
bicluster 117 upstream sequences
Phaeodactylum tricornutum
29
upstream
[+] Show/hide bicluster #117 columns (arrays; conditions).
bicluster 117 arrays
Phaeodactylum tricornutum
75
[+] Show/hide bicluster #117 ratios.
bicluster 117 ratios
Phaeodactylum tricornutum
29x75
GENES GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_3 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Control_1 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Copper_3 GSE34988_Dispersant_2 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_5 GSE34988_Salinity_15ppt_2 GSE34988_Silver_1 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_5 GSE34988_Simazine_2 GSE34988_Simazine_4 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3
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7026 -0.309961678363422 0.775673650475069 0.838007962482187 -0.588449423165024 -1.44582471696018 0.932035862302521 0.099995764033742 -0.562505374687078 NA NA -0.153159443987999 -0.317007356623984 -0.24893812838742 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.93721402659891 2.01320551713152 2.11582178507375 2.94108880142489 2.67349562814603 0.782769301708078 0.804746239224133 -1.240336094895 -0.975752899056204 -0.346389067577052 -0.634446564689353 -0.386281974660116 -0.579931358658621 -0.270090712981052 -0.601922655125612 -0.490767670196064 -0.695589415799838 -0.632723272773617 -0.270090712981052 -0.603623029230248 -0.824847101504368 2.6111572929513 3.00642973854383 2.19819422127723 0.325564352525474 -0.177539764204281 -0.272576232966957 1.96233450468383 1.96233450468383 1.28155566775697 0.0860725824342973 0.913907924232284 1.68960806244455 1.30514039588761 1.15778072911736 0.402090408212399 0.574920115241527 -0.173818734701798
8706 0.169145152224817 0.496195602635323 0.403294034830861 -0.355420991975573 -1.36353030105007 0.471449126157638 0.308927360621889 -0.869841965412657 0.0173416997062117 0.234958837656085 -0.0232979561834143 0 0.046886169296024 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.17604178777106 2.20361032310549 2.25400468049816 2.72222594705973 2.52392203268822 -0.227941265012391 -0.192111158104561 -1.24210638331646 -1.07492986964102 0.42890962509793 -0.390237151379109 -0.743572418230804 -1.09743755624859 -0.723696957594222 -1.2784875860818 -0.346762717055924 -0.733865271400101 0.286866780722767 -0.0691022106818744 0.411527754787197 -1.17794950891709 2.37378294467872 2.85631888234339 2.92304495254968 -0.176631554816362 -0.080323122221056 -0.0867816192993931 0.989979755865174 1.12080122746133 0.847914153251246 -0.33484862316347 -0.321672470148981 1.60560188145095 1.26856118204494 1.30006986784129 -0.00172364884574647 -0.172358188747976 -0.0948916855691402
8737 -0.448188530178896 0.791440123471015 0.862125596379725 -0.468586174457942 -1.30187902849719 1.35042556632398 -0.143208297755879 -0.307968360549415 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.92849503049285 1.26057142352838 1.6132940327406 2.57422373739701 2.6383819930258 0.611708867573493 0.582239057972244 -1.23762883641145 -1.40382357214243 -0.20115184668315 -0.6790186742782 -0.110742551941834 -0.254412793143699 -0.0570518122081366 -0.761029441927099 -0.62663685760986 -0.816516437271427 -0.101708858982172 -0.826300911754889 -0.845992380187013 -1.29074235172382 2.43502149948638 3.26950136883263 3.01710080841924 0.265342906761621 -0.0732295798310196 -0.13269118963176 1.4486564789914 1.60753904958274 0.967199245165591 0 0.476097172035686 1.09707793563464 0.602906491595721 0.614635713688521 0.182509808120485 0.451151089512462 -0.256305876492308
[+] Show/hide bicluster #117 motif PSSM #1. bicluster 117 motif PSSM #1 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0.142857 0 0.857143 0
2 0.571429 0.428571 0 0
3 0.666667 0 0.285714 0.047619
4 0.571429 0 0.428571 0
5 0 0.952381 0.047619 0
6 0.428571 0 0.571429 0
7 0.142857 0.190476 0.666667 0
8 0.809524 0.142857 0 0.047619
9 0.857143 0.095238 0.047619 0
10 0.047619 0.285714 0.428571 0.238095
11 0.47619 0.52381 0 0
12 0.857143 0.047619 0.095238 0
13 0.571429 0.095238 0.333333 0
14 0 0.761905 0.238095 0
15 0.761905 0.238095 0 0 [+] Show/hide bicluster #117 motif PSSM #2. bicluster 117 motif PSSM #2 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0 0.529412 0.411765 0.058824
2 0 0 0.176471 0.823529
3 0 0.470588 0 0.529412
4 1 0 0 0
5 0 1 0 0
6 0.882353 0 0.058824 0.058824
7 0 0 1 0
8 0 0.058824 0 0.941176
9 0 0.588235 0 0.411765
10 0.764706 0 0.235294 0
11 0.470588 0 0.529412 0 |