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[+] Show/hide bicluster #127 rows and columns.
bicluster 127
Phaeodactylum tricornutum
25x76
[+] Show/hide bicluster #127 rows (genes).
bicluster 127 genes
Phaeodactylum tricornutum
25
[+] Show/hide bicluster #127 rows (short gene names).
bicluster 127 short names
Phaeodactylum tricornutum
25
short_name
[+] Show/hide bicluster #127 rows (long gene names).
bicluster 127 long names
Phaeodactylum tricornutum
25
long_name
[+] Show/hide bicluster #127 rows (NCBI RefSeq gene IDs).
bicluster 127 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #127 gene upstream sequences.
bicluster 127 upstream sequences
Phaeodactylum tricornutum
25
upstream
[+] Show/hide bicluster #127 columns (arrays; conditions).
bicluster 127 arrays
Phaeodactylum tricornutum
76
[+] Show/hide bicluster #127 ratios.
bicluster 127 ratios
Phaeodactylum tricornutum
25x76
GENES GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_4 GSE34988_Control_2 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_1 GSE34988_Oil_3 GSE34988_Silver_2 GSE34988_Simazine_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_6h_2 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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[+] Show/hide bicluster #127 motif PSSM #1. bicluster 127 motif PSSM #1 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0.07309 0.022148 0.688815 0.215947
2 0.142857 0.095238 0.761905 0
3 0.52381 0 0.095238 0.380952
4 0 0.714286 0.285714 0
5 0 0 0.952381 0.047619
6 0.52381 0.238095 0.047619 0.190476
7 0 0.666667 0.190476 0.142857
8 0.142857 0 0.857143 0
9 0.142857 0 0.857143 0
10 0.761905 0.238095 0 0
11 0.619048 0 0.333333 0.047619
12 0.761905 0.190476 0 0.047619
13 0.095238 0.190476 0.714286 0
14 0.727021 0.011074 0.249169 0.012735
15 0.584164 0.011074 0.344407 0.060354 [+] Show/hide bicluster #127 motif PSSM #2. bicluster 127 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0 1 0 0
2 0 0 1 0
3 0.545455 0.181818 0.181818 0.090909
4 0.090909 0 0.818182 0.090909
5 0.181818 0 0.090909 0.727273
6 0 0.909091 0.090909 0
7 0.181818 0 0.818182 0
8 0.181818 0 0 0.818182
9 0 0.636364 0.090909 0.272727
10 0 0 1 0
11 0.181818 0.272727 0.272727 0.272727
12 0 0 1 0
13 0.272727 0.454545 0.272727 0
14 0.272727 0.090909 0.636364 0
15 0.909091 0.090909 0 0 |