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[+] Show/hide bicluster #135 rows and columns.
bicluster 135
Phaeodactylum tricornutum
36x74
[+] Show/hide bicluster #135 rows (genes).
bicluster 135 genes
Phaeodactylum tricornutum
36
[+] Show/hide bicluster #135 rows (short gene names).
bicluster 135 short names
Phaeodactylum tricornutum
36
short_name
[+] Show/hide bicluster #135 rows (long gene names).
bicluster 135 long names
Phaeodactylum tricornutum
36
long_name
[+] Show/hide bicluster #135 rows (NCBI RefSeq gene IDs).
bicluster 135 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #135 gene upstream sequences.
bicluster 135 upstream sequences
Phaeodactylum tricornutum
36
upstream
[+] Show/hide bicluster #135 columns (arrays; conditions).
bicluster 135 arrays
Phaeodactylum tricornutum
74
[+] Show/hide bicluster #135 ratios.
bicluster 135 ratios
Phaeodactylum tricornutum
36x74
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_3 GSE34988_Cadmium_5 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Copper_2 GSE34988_Copper_5 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_4 GSE34988_Dispersed_oil_5 GSE34988_Oil_2 GSE34988_Oil_4 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_3 GSE34988_Silver_1 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_5 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep2 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep2
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7866 0.0417859469598504 0.11728884248751 -0.292975822740779 -0.246673833389415 NA NA 0.608675023275321 -0.319690080847845 -0.320445109803122 0.537852877054445 0.4570239083266 NA NA NA NA NA NA NA NA NA 0.119271390419713 0.401807161959966 -0.410731245336195 -0.406962740942675 -0.529463775424942 -1.23296204322335 -2.59957406760001 -2.32231149572227 0.347864731307928 0.513860363888673 -0.845034135248244 0.407694903566169 0.103851827713674 0.229190764362507 -2.3603753447829 -1.90990635567197 1.16333072143212 -2.45927626497263 -1.81380439880507 -2.14857300893897 0.251154150117451 1.4069381163901 -0.0280726468141895 -0.00230732604038923 -0.0619311264968631 0.245679650366871 0.0962458249277135 0.26799891217933 0.471137855835027 0.545835753155751 -0.636261546792049 -0.823368227329115 -0.861244864223473 -0.364011089228957 -0.535643843410388 -0.0443012855893117 -0.19995135833758 0.234849662043237 -0.00926381355484331 -0.14159673003171 -0.138917575432409 0.271857726834699 1.2584095599658 0.00230162189108561 0.164349703968981 0.00230162189108561 0.144831052366388 0.102459455873037 0.682591675746625 0.552084989036051 0.689210226706783 -0.0472693182715103 -0.182737690714317 -0.0718355345962619
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[+] Show/hide bicluster #135 motif PSSM #1. bicluster 135 motif PSSM #1 Phaeodactylum tricornutum 23x4
POSITION A C G T
1 0.222222 0 0.111111 0.666667
2 0.111111 0.555556 0.333333 0
3 0 1 0 0
4 0.111111 0.444444 0.444444 0
5 0.222222 0.555556 0.222222 0
6 0.666667 0.222222 0 0.111111
7 0.111111 0.888889 0 0
8 0 0.333333 0.666667 0
9 0.222222 0.555556 0.222222 0
10 0 0.888889 0.111111 0
11 1 0 0 0
12 0.333333 0.444444 0.222222 0
13 0.111111 0.555556 0 0.333333
14 0.222222 0.666667 0.111111 0
15 0 0.666667 0.111111 0.222222
16 0.333333 0.444444 0.111111 0.111111
17 0.222222 0 0.777778 0
18 0.111111 0 0 0.888889
19 1 0 0 0
20 0 1 0 0
21 0 0.777778 0.222222 0
22 0.555556 0 0.444444 0
23 0.777778 0 0 0.222222 [+] Show/hide bicluster #135 motif PSSM #2. bicluster 135 motif PSSM #2 Phaeodactylum tricornutum 19x4
POSITION A C G T
1 0.2 0 0 0.8
2 0.4 0 0 0.6
3 0 0.8 0.2 0
4 0 0.8 0.2 0
5 0 0 0 1
6 0.8 0 0.2 0
7 0.2 0 0 0.8
8 0 1 0 0
9 0 0 0 1
10 0 0 0 1
11 0 0 1 0
12 0 0 1 0
13 0 0.4 0 0.6
14 1 0 0 0
15 0 0.2 0.8 0
16 0 0 1 0
17 0 1 0 0
18 0.8 0.2 0 0
19 0 0.6 0 0.4 |