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[+] Show/hide bicluster #151 rows and columns.
bicluster 151
Phaeodactylum tricornutum
25x76
[+] Show/hide bicluster #151 rows (genes).
bicluster 151 genes
Phaeodactylum tricornutum
25
[+] Show/hide bicluster #151 rows (short gene names).
bicluster 151 short names
Phaeodactylum tricornutum
25
short_name
[+] Show/hide bicluster #151 rows (long gene names).
bicluster 151 long names
Phaeodactylum tricornutum
25
long_name
[+] Show/hide bicluster #151 rows (NCBI RefSeq gene IDs).
bicluster 151 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #151 gene upstream sequences.
bicluster 151 upstream sequences
Phaeodactylum tricornutum
24
upstream
[+] Show/hide bicluster #151 columns (arrays; conditions).
bicluster 151 arrays
Phaeodactylum tricornutum
76
[+] Show/hide bicluster #151 ratios.
bicluster 151 ratios
Phaeodactylum tricornutum
25x76
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE34988_Ammonia_1 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Cadmium_5 GSE34988_Control_5 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersant_5 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_4 GSE34988_Dispersed_oil_5 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Oil_4 GSE34988_Silver_1 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_2 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_2 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3
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33436 0.130842726848377 0.403936506836268 -0.0532483448983349 -0.214898562857741 -0.589166361615519 -0.35562934084593 -0.573914188109232 -0.848110993113787 -1.47446945412835 -1.20518681574977 -0.76790586026414 -0.963692800722033 0.0280560094334361 -0.560248088506217 -0.363844975452808 -0.606057858508642 -0.583073099282085 -0.53221741075291 -0.989861425177208 -0.875829557894103 -0.57627725058407 -0.647502162313564 -0.712991420027095 -0.363979539433462 -0.937167790151818 -1.19643450495495 -0.856784727956379 -0.511761469500764 -0.709738409076225 0.864248546063463 0.931018910280832 1.23508821914014 0.920335162110804 0.91990924231299 0.738487795389368 0.809162335670892 1.22745475352999 1.11964904407715 0.744802499503735 0.247326958525946 0.8930234259206 0.227613756284677 0.614000315937958 -2.45552074985445 -1.22560974485779 -1.00923122910605 -0.958311638660908 -0.964725538956083 -0.641871637992293 2.12792786910951 2.18141374376679 2.18499439321977 2.15642440809311 0.061271933029189 -0.00974041918784683 0.884784777395846 0.453324144987543 0.429455593837123 -0.249196943988627 0.691844072750774 -0.442125018620455 0.0187829968260044 0.711141223015792 1.57924216899777 -0.741488705594343 0.254927241193561 0.766988205283007 0.427391481448235 2.64849088267209 2.37957805947351 0.706043378998499 0.322003190037578 0.389302008110743 3.24082485975983 3.26186995494175 3.31107504103492
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44962 -0.512018992859558 -0.43886723554263 -0.513175126955084 -0.490893269841307 -0.524421158611566 -0.478806413388079 0.0616718245942114 -0.592029778455945 -1.62270966121458 -0.769778038426122 -0.643685849844054 -1.30781026452313 -0.460326135386591 -0.386601566176879 -0.503362701577055 -0.560225580519016 -0.587632264768962 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.29569523973954 1.34915865542634 1.41488374262696 0.854172939072448 0.271916936356998 0.104629445434812 0.331548714384279 -0.582685162520104 -0.536785345543371 -0.484950326670937 2.20430236745876 -0.59679589458518 1.13889266300506 1.45750340774616 0.788815005123662 -1.0826781078369 -0.137202500140683 0.100143778295482 0 0.721336517638775 0.374747402384683 0.540391060136138 0.442077571455244 0.426312194766152 1.57825598414518 1.57077229189306 1.91888573117563
45053 -0.0081573601766571 0.0534756903255423 -0.123027342025816 -0.0845528179847725 -0.221843205929792 -0.395209226728643 -1.71020018231772 -1.82352656995296 -2.3231962285895 -1.95303901454867 0.191754236909601 -1.66780808443787 -1.03247190265997 -1.5557798659951 -0.713506103903781 -0.0501554863115316 -0.0286494268181818 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.64605755919184 1.75410869529328 1.79099933431598 1.55861199436072 1.21588791142188 1.21917501993977 1.17447596647566 0.762462785151166 0.380565461906432 0.130973862406332 1.41853037185968 -0.225905324262236 1.50819426791158 0.983090911895072 0.841502466181474 -0.582783986129284 0.848014913096484 0.720857790927778 0.866738966452686 1.98078800142678 1.8658234702112 0.856401813158357 0.845901569822125 0.933799587023846 1.96561348419668 2.06696865433857 1.97386899194971
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47279 0.114085608241216 0 0.0856891904143054 0.168078797067033 -0.113285709147501 -0.0293962916940558 -1.75582950427341 -1.7569283656534 -2.00292833306089 -1.54290536439107 -0.145379660535113 -1.51092439875044 -0.863183110515129 -1.47491094180362 -0.938113658118956 -0.235286318921035 -0.0572577770020443 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.74465714364137 1.71340647300873 1.76579889874785 1.80635770049188 1.32282136060959 1.31784432131348 1.13991862395896 0.794270924946007 0.773356828353635 0.225965836754615 0.757568336858831 -0.251613221147252 0.951985047036276 0.752525421203332 1.90228751643147 -0.626677441569071 0.944173096633821 0.0255795395281105 0.148754677695631 1.3421346905956 1.40734314493075 1.05410943782265 0.622325484524585 0.804995096447433 1.72415260584477 1.78460580768851 1.69473595810544
47653 0.0387953448041624 0.205228224789124 0.0861197100395029 0.170133751693254 -0.174252921161678 -0.025190032911036 -0.630062773647862 -1.68193098228977 -1.88377028624257 -1.20460360943067 -0.591338326769146 -1.6750148896625 -0.919308584987009 -0.88493727073069 -0.588355296555997 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.4511875700712 2.57960642129063 2.69132599271452 1.59909298837106 1.67784971946652 1.30753880635571 1.28740874913457 -0.248848485739433 -0.262931039330809 -0.54044254614595 1.33449308395763 -0.0294220040562973 0.710658642936854 -0.226609311212077 1.33624486725313 -0.204544346165386 0.683856369411814 0.923327566848544 0.860490908657957 1.40980984977235 1.02943212519508 1.37684805145045 1.21654212619311 1.1627452216258 1.58695796831809 1.80300057062181 1.67156380388735
48751 0.553001865160273 0.537700720212084 -0.353084007374063 -0.294275992452709 -0.281371412375923 -0.217401565423855 -1.96399776507662 -2.09429162308905 -2.2920266600942 -1.92299991417267 -0.53883806353364 -1.80706701027426 -1.30885435671547 -1.950905146833 -1.17642018192173 -0.270854179613343 -0.256841649161392 -1.33081155133444 0.107653984560831 0.216034387844109 0.117528831751617 -0.054974049432449 0.463380721626224 0.0553635907736698 -0.29242919218876 -0.563856740730029 -0.364420953811213 -0.0688313635952356 -0.38119686366676 0.890071620491104 0.785616787517567 1.11745784297075 0.704254295018922 0.915529038662012 0.728083081443682 1.03249054820322 1.12486433453025 0.85468593459232 0.709422468728988 1.43582983514436 0.976288742274179 0.735196380943836 1.1213201469175 -1.06762529532486 -0.796160050661674 -0.595589103138846 -0.820066633269182 -0.539748035528289 -0.195072866379587 2.09919108171674 2.1222231455167 2.09869025004426 2.23449873507667 0.855411824304624 0.914711310359757 0.898840300099432 -0.0758232397020564 -0.362949135954962 -0.245996428443022 0.171535966193195 0.104011854268253 0.498894667311091 -0.131438724415087 2.0149969220283 -0.0593225365029188 0.862373867283859 0.750760467738526 0.637651200015925 2.34376828660881 2.15130311791699 0.519575888351965 0.330611174410998 0.497240919836644 2.14412730616307 2.14947389844289 2.04781545941022
48790 -0.0460258834331171 0.0563937098874218 0.404446734646203 0.232011487134787 -0.0827696358390732 -0.289344747790669 -0.684834824868194 -1.16550675693282 -1.29034003922099 -2.26365021515741 -1.12878036377997 -0.618059564590283 -0.584807915267318 -0.885594587029556 -0.573345021800201 -0.332910686666959 -0.141652222371831 -1.79752665987356 -1.451131009805 -1.11258781787856 -0.727435436413968 -0.692134498329849 -0.935862433486824 -0.117930085970014 -0.758119102492996 -0.728982030137285 -0.444429254499549 0.0593124305717304 -0.692341608685438 0.915796352044959 1.09355235529355 1.1938802164791 0.902121701673666 0.946632895279666 0.221046002330735 0.446165989908545 0.810067289450139 0.65576718132748 0.0297287769638446 0.5937490797026 0.285808110026038 -0.370457209535338 0.311003590371687 -1.32242625242327 -1.40335857671627 -1.20925999395269 -1.213358571475 -0.863576087727481 -0.306040050451697 2.64863681296443 2.81411360798369 2.89810981916359 1.99257658874901 0.956238987594473 0.521376915693586 0.628634573646404 0.5184164108517 0.868699402844431 -0.413031542881714 1.10095555817176 -0.258249585848411 0.860641951240884 0.557767800803065 2.1870602551226 -0.202365418506549 0.579296102451544 0.719953771770791 0.470114878297035 1.71692911854519 1.17608978865056 0.991791127119334 0.698398808888635 0.810063367504757 1.2509331155592 1.27846234271346 1.27685298958722
49414 -0.263385361001797 -0.371401461506478 0.611117870767743 0.838439890191438 0.0136728854904372 -0.327767838986226 -1.50436525240735 -1.17437606536555 -1.47026694949379 -1.24252690165854 -0.837143086724927 -1.73371638784335 -0.452471511628198 -0.931138453279919 -0.405145813356232 -0.765156763473332 -0.199628399983567 -2.31531791655006 -1.25648377515721 -0.78774484045836 -0.728847612289603 -0.897566320236096 -0.794143802740024 0.0820504912628702 -0.242474423666396 -0.493268128138598 -0.107318988036197 0.108922272948479 -0.359845603352443 1.00250493168197 0.963390898090174 1.65462299854226 1.13463419251225 1.34257913043515 0.446244929362935 0.983834928457164 0.713501965768301 0.961139952402539 0.030024689019904 0.547604247800299 0.261269584699328 -0.547480615643307 1.02416231239827 -0.775392238205434 -0.768517349051561 -0.467993932041174 -0.240840399426454 -0.124430886472939 0.318425434660232 2.66488803089876 2.52666236244087 2.53015572047679 2.8281551842061 0.604516094962541 0.29824965741441 0.577696329075281 -0.0832998584229231 0.23404173754927 -0.97696314394271 0.124639655929171 -0.113788489628837 -0.830526766184342 0.0199661916731328 2.1379165117126 -0.578128431023264 -0.224116779542191 0.497173049802698 -0.426670683430671 2.02756815580747 1.34265502429287 0.368777494643503 0.0262148410168469 -0.048373937659319 2.22710658928758 1.9031055902552 2.12184324439019
50486 0.502586233156087 0.673218994702395 -0.254864499959245 -0.150421377077877 -0.221214132100811 -0.560098732939292 0.0373074644407855 -0.302868125353272 -1.77923251307235 -0.647773814025542 -0.870983688069152 -1.3860628848396 0 -1.15112405867829 -0.93682624117882 -0.365159400647442 -0.0808116758683315 -1.85873994491473 -1.78731037255289 -1.82689063363185 -1.88787970318116 -1.71879739820674 -0.693944143886877 -0.0519502431806673 -0.464910749879937 -1.24859230029198 -1.18582376119556 -0.999219011273394 -0.660363171975741 0.25857002577007 0.218987339324982 0.657310567638671 0.535943436681726 0.654088576661856 0.928628277397901 0.80466730624604 0.895103050813144 0.852115531260375 0.843194691758584 0.666303279246907 0.815448884107882 0.848132534039878 0.852687714496488 -0.877244110229042 -1.0406757565449 -0.0926744123249486 -0.385832582235521 -0.301180053379828 -1.17447673017117 1.45723993504586 1.617651298163 1.06686372412511 1.81725729623951 0.606600489049869 0.511219069509581 0.868647684996691 1.08045300319518 1.05060540918497 -0.50507090170751 0.663178251295692 -0.130709011029271 0.121393539338441 1.35902698371006 1.87118853878368 -0.279158079648387 0.15666987565929 -0.271997912728921 -0.372591260074164 1.45469113171377 1.21104524966327 1.03697045727475 0.590450685329188 0.817067481815118 2.27542036464565 2.07894583680981 1.87754753494816
[+] Show/hide bicluster #151 motif PSSM #1. bicluster 151 motif PSSM #1 Phaeodactylum tricornutum 11x4
POSITION A C G T
1 0.563372 0.111628 0.261628 0.063372
2 0 0.35 0 0.65
3 0 0.05 0 0.95
4 0 0.15 0.85 0
5 1 0 0 0
6 0 0.95 0 0.05
7 0.6 0 0 0.4
8 0.05 0 0.95 0
9 0 0 0 1
10 0.15 0 0.75 0.1
11 1 0 0 0 [+] Show/hide bicluster #151 motif PSSM #2. bicluster 151 motif PSSM #2 Phaeodactylum tricornutum 10x4
POSITION A C G T
1 0.95 0 0.05 0
2 0.45 0.15 0.4 0
3 0 0.55 0.45 0
4 0.95 0 0.05 0
5 0.8 0 0.2 0
6 0 0.05 0.95 0
7 0.95 0.05 0 0
8 0.9 0.05 0.05 0
9 1 0 0 0
10 0.1 0 0.85 0.05 |