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[+] Show/hide bicluster #176 rows and columns.
bicluster 176
Phaeodactylum tricornutum
25x78
[+] Show/hide bicluster #176 rows (genes).
bicluster 176 genes
Phaeodactylum tricornutum
25
[+] Show/hide bicluster #176 rows (short gene names).
bicluster 176 short names
Phaeodactylum tricornutum
25
short_name
[+] Show/hide bicluster #176 rows (long gene names).
bicluster 176 long names
Phaeodactylum tricornutum
25
long_name
[+] Show/hide bicluster #176 rows (NCBI RefSeq gene IDs).
bicluster 176 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #176 gene upstream sequences.
bicluster 176 upstream sequences
Phaeodactylum tricornutum
24
upstream
[+] Show/hide bicluster #176 columns (arrays; conditions).
bicluster 176 arrays
Phaeodactylum tricornutum
78
[+] Show/hide bicluster #176 ratios.
bicluster 176 ratios
Phaeodactylum tricornutum
25x78
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_3hr_2 GSE17237_highlight_48hr_1 GSE31131_Cadmium_0.12mg_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Control_1 GSE34988_Control_3 GSE34988_Control_6 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_1 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_3 GSE34988_Salinity_15ppt_5 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_2 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_6h_1 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_6h_rep2 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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9344 -0.586751206685312 -0.553594332949352 -0.346587905030257 -0.601089314246807 -0.31589539353143 0.604364675692887 0.774645385290794 0.320570960794062 0.358083034701825 0.943698394428749 0.0454293976768768 -0.377005602800822 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.01711967688709 -3.04571174292198 -3.15500474972654 -1.34298421253801 0.548883250706285 0.52718749180789 0.232142918036618 0.295013081934667 0.765354239113964 1.24682181278122 1.6812625951141 0.766767473980024 0.281905529240722 1.08842723771894 0.328703030615294 0.875421210519935 0.403900107655503 -0.372958518499201 1.2022151720763 -1.92688136323392 -2.1788187459025 -2.08010751832332 0.0449975192009038 -0.354496355027133 0.0657609535469393 -0.452067292386846 -0.339483950456026 0.330190584440791 0.600666557170196 0.520446769332163 -0.201632834094851 -0.106316269181533 -0.42132670913297 0.698796880478495 0.827530969817414 0.748088107421243
[+] Show/hide bicluster #176 motif PSSM #1. bicluster 176 motif PSSM #1 Phaeodactylum tricornutum 20x4
POSITION A C G T
1 0.166667 0.777778 0.055556 0
2 0.611111 0.388889 0 0
3 0.888889 0.055556 0.055556 0
4 0.055556 0.777778 0 0.166667
5 0.5 0.222222 0.166667 0.111111
6 0.777778 0 0.222222 0
7 0.277778 0.666667 0 0.055556
8 0.444444 0 0.5 0.055556
9 0.166667 0 0.611111 0.222222
10 0.111111 0.055556 0 0.833333
11 0.888889 0.111111 0 0
12 0.611111 0.333333 0.055556 0
13 0.444444 0.166667 0.222222 0.166667
14 0.333333 0.222222 0.333333 0.111111
15 0.055556 0.166667 0.222222 0.555556
16 0.666667 0.111111 0.111111 0.111111
17 0.055556 0 0.166667 0.777778
18 0.222222 0.277778 0.444444 0.055556
19 0 0.888889 0.111111 0
20 0.888889 0 0 0.111111 [+] Show/hide bicluster #176 motif PSSM #2. bicluster 176 motif PSSM #2 Phaeodactylum tricornutum 21x4
POSITION A C G T
1 0 0.111111 0.888889 0
2 0 0.444444 0.555556 0
3 0.444444 0.111111 0.111111 0.333333
4 0.222222 0.222222 0.555556 0
5 0.111111 0.555556 0 0.333333
6 0 0.666667 0.333333 0
7 0.666667 0.111111 0.222222 0
8 0.222222 0.666667 0.111111 0
9 0.222222 0.333333 0.444444 0
10 0.666667 0.333333 0 0
11 0.444444 0 0.555556 0
12 0.333333 0 0.666667 0
13 0 0 0.666667 0.333333
14 0 1 0 0
15 0.666667 0.111111 0.222222 0
16 0 0.666667 0.222222 0.111111
17 0 0.222222 0 0.777778
18 0.222222 0 0.777778 0
19 0 0.888889 0 0.111111
20 0 0.888889 0.111111 0
21 0.111111 0 0.888889 0 |