[+] Show/hide bicluster #191 rows and columns.
bicluster 191
Phaeodactylum tricornutum
24x81
[+] Show/hide bicluster #191 rows (genes).
bicluster 191 genes
Phaeodactylum tricornutum
24
[+] Show/hide bicluster #191 rows (short gene names).
bicluster 191 short names
Phaeodactylum tricornutum
24
short_name
[+] Show/hide bicluster #191 rows (long gene names).
bicluster 191 long names
Phaeodactylum tricornutum
24
long_name
[+] Show/hide bicluster #191 rows (NCBI RefSeq gene IDs).
bicluster 191 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #191 gene upstream sequences.
bicluster 191 upstream sequences
Phaeodactylum tricornutum
23
upstream
[+] Show/hide bicluster #191 columns (arrays; conditions).
bicluster 191 arrays
Phaeodactylum tricornutum
81
[+] Show/hide bicluster #191 ratios.
bicluster 191 ratios
Phaeodactylum tricornutum
24x81
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_30min_1 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Control_1 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Copper_2 GSE34988_Copper_3 GSE34988_Copper_4 GSE34988_Copper_5 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_2 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_4 GSE34988_Dispersed_oil_5 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_1 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Oil_4 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_3 GSE34988_Salinity_15ppt_5 GSE34988_Silver_1 GSE34988_Silver_2 GSE34988_Simazine_1 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_24h_1 GSE42039_light_24h_3 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_2 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep3
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46711 -1.19412783091411 -1.39891002961936 -1.10378274325002 -0.784563433503602 -0.793932553705803 -0.488097701391097 0.0452193894330519 0.669751557654344 0.201636851208799 -0.478728581188896 0.393690430896489 0.34353886889985 1.22854596319976 0.409249862660859 0.00440348649503453 -0.00675245877430059 -0.196135839204364 0 -1.42774015092727 -0.165793274206664 -0.323428721608697 -0.440275034987576 -0.269569664903473 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.92095195951923 -3.39137865765923 -3.01451201156625 0.547558622959788 -0.464983318717918 0.123158728763503 0.541053387039086 0.202416189432248 1.05261719120054 2.1453243784552 1.70868558960279 1.27600018363674 1.07074848907378 -0.589605204674938 -0.645005657253397 0.240857453049328 0.197232376825904 -0.65305137321101 -0.669244080564337 0.420048226312795 -1.04009240782501
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48731 -0.53587526578913 -0.830118857976596 -0.652558069587608 -0.513046021567689 -0.179802470501927 -0.202948787559777 1.05677207930772 0.222417105396228 -0.262666285569031 0.695911484190742 1.32698789195212 -0.0161421552611055 0.798757229408335 0.715595365875007 0.683339546227129 0.74492460324283 0.296834100101399 0.895508834710149 -0.26548823381307 -0.0381882295766169 -0.257551900717755 -0.230683148560464 -0.113626198815024 -3.32049178660981 -3.00161861063577 -1.55524530398995 -1.32793077781759 -2.10298568010896 -0.207923977171642 -0.209918148117761 -0.424390193928843 -0.00762450531938363 0.174326172343328 0.297408584028181 -0.118667686771618 -0.213811463280928 -0.569692023648872 -0.731783272251441 -0.555337549759894 -0.767159215438717 -0.666713505495396 -0.596885141317809 -0.445396871779322 -0.470738109693571 -0.816726038785027 -2.92954985735705 -3.0842736332401 -2.13799860660583 -3.92902637667595 -2.69826361342126 -0.703094870793283 -0.18229243212447 -0.403002616479985 -0.158612597214528 0.13473330311459 -0.132726875484141 0.033349929525798 0.257885423262528 0.352253465223921 -0.0757701671248762 -2.6191432207479 -2.84311941932307 -2.9030465632054 0.609575756169819 -0.10358459358093 0.704892323930828 1.0023095646252 1.22120007666435 1.09968551243846 1.0860402954083 1.62354922346124 1.02468872662284 1.41676917090767 -0.469197832864553 -0.51160242923915 0.952649710857828 0.686418945759743 -0.502919718016651 -0.487143897388302 0.791938648127736 -0.129739888320448
50493 -0.625751198236486 -0.433727424941286 0.00135634046511222 -0.0873190897276875 0.112360116389912 0.155740902383512 1.26593814981531 1.05051427019297 0.157737694444688 0.267446426317031 0.763601407064125 -0.0525889428233996 0.652221239025558 0.269972719148423 0.297232439523519 0.572808882547862 -0.569649634702998 0.367145679774087 -0.317753997209279 0.127907024546736 -0.434690733571438 0.108353773212856 -0.408056206876838 -2.21802013685562 -2.22138444439997 -2.60022502076566 -1.94793480820423 -1.7229801698991 0 0.115429190253608 -0.242152561761123 0.0559132398860568 0.434793650020539 0.648332124129264 0.725713188061864 0.520873633305451 -0.720589151692738 -0.491169086663248 -0.775493354496584 -0.461886903008912 -0.625509696762906 -0.233148302918879 -0.626115777379456 -0.714228967067669 -1.1099121846316 -3.23281525286412 -3.61865825363246 -3.43434745649638 -2.42659253169245 -3.67075066699686 -0.261560515531845 -0.878075605677391 -0.966014800136606 -0.34257259335699 0.0429043628909525 -0.0777777429433475 0.15636715315169 0.750319203685294 0.281946707302628 0.0350743096458736 -2.99821297942901 -3.05331736137091 -3.10724011414022 0.703841256862886 0.0198079888419455 0.35809706412419 0.106099406590551 0.00363317449801021 0.696551902337478 0.760751483664888 0.313143289872375 0.213933071015013 0.301919837640197 -0.284831370956667 -0.224044142431758 0.281181840565908 -0.0828623977536553 -0.583099124112392 -0.440014933505797 0.159739044617093 -0.701584702391411
51560 -0.000506070404060051 -0.335748553592326 -0.230179406242175 -0.161196818355359 -0.230018231971412 0.0375310574961471 0.602285702251765 0.185413286149863 0.394561078606235 0.279519719363308 0.225376446585695 -0.398611354418249 -0.026069921489873 0.337545680323616 0.330985887503537 0.341223677182441 -0.645214435657372 0.347030786158053 -0.541490733707464 -0.410206231456982 -0.510891798402996 -0.302657864061854 -0.501911168036049 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.47033423909454 -2.43713469971224 -2.44905428951462 0.0543901505999089 -0.327877498138728 0.582956516035185 0.548113821509741 0.873566830330952 1.07803286823354 0.867286362130519 0.385876464510295 0.394857724629609 1.21113840521233 -0.314886262675194 -0.423290938800719 0.507418383726002 0.467510926634122 -0.143611006996104 -0.219036709232156 0.816203816642482 -0.375370444805878
54417 -0.419154722017128 -0.501124540681925 0.030319591704056 0.0042912606588362 -0.547742447031572 -0.544634586608262 1.6709435698672 1.13799989482697 0.660962743976557 -0.200369117867174 1.19348297303411 -0.216203666723938 1.71508295752926 0.574245668515155 -0.421388496696382 0.587962987458539 -0.228347631328021 0.566413860248414 -0.628181644437889 0.230205519654757 0.495741114222349 0.35677313539405 0.151203707694221 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.37116370291507 -3.19241459927172 -3.24187309180404 0.3115420994664 0.00758235212392183 0.603747326678976 -0.00329206801067498 0.567605219408405 1.08244105505201 1.66348595221939 1.35094963146723 1.05101813181773 1.29238024671713 -0.527395080458243 -0.477886505747938 -0.0382225875149848 0.397619395883092 -0.762603963510806 -0.674143086452929 1.21644728859002 -0.906789578955589
54801 -0.543272815594274 -0.800229350153204 -0.211535639518193 -0.186375797512423 -0.157721533005852 -0.0253994009755051 1.36877500339923 -0.0956605893916187 0.428784669143657 0.250643669282802 0.613641949051052 -0.523189204674668 0.427167916333286 0.0942449662219341 0.544536249675203 0.991492106851458 -0.817356679637132 0.734905398673863 -0.525015622835087 -0.645978552122828 -0.725788832426132 -0.543284463669276 -0.658087890895605 -2.25707785979916 -1.99071329154132 -2.69690439618928 -2.47435627518824 -1.80864467727032 -0.162271499404165 -0.107748981431119 -0.401907858949423 -0.0820327714524608 0.456300350626023 0.60720218731623 0.565588740484687 0.33511457036733 -0.052618749605765 -0.145421024861323 0.0477828847009335 -0.053257342504904 -0.71067231711876 0 -0.313698792405818 0.0791601197008795 -0.701280124801856 -2.97775427755894 -3.15255833689303 -2.98096914625968 -2.19186436468546 -3.14294832557358 -0.152989295200281 -0.67565717863013 -0.694250534833894 0.139857691080275 0.600249637716336 0.513831159854442 0.529548548099671 0.398061874248891 0.163329959979658 0.849290303576501 -2.70254583208634 -2.71035598655083 -2.77930815895406 0.603749691022521 0.0500641978465392 0.356715495694965 0.211307329452991 0.503819185917634 -0.455505466973545 -0.0948681880146315 0.494775311780096 0.676823141663091 0.194625405040068 -0.418839732811873 -0.394059962020037 0.152870288498957 0.216493256874524 -0.433567291385638 -0.394609685093868 0.399626032250554 -0.134555306575851
54901 -0.536294702393923 0.0673193925444589 0.162060249300543 -0.397054352313012 -0.389159280916672 -0.18316969084852 1.56726812044699 1.38662888689872 0.402228321177215 0.431267829240481 0.79797236358759 0.530609359419342 0.619543750030299 0.485406487006477 1.07216101584486 0.742175740828363 0.366355987687298 0.520733342836283 0.133745652338213 0.00847240129119143 0.594746048508157 0.353924838906878 0.557588971581926 -1.50741583506355 -1.78583696332302 -2.77567307038078 -2.57843696128988 -1.85872096087872 -0.178068429227636 0.301693596417507 -0.419488590525327 0.00747895201667131 0.758423864272026 0.731225271538258 1.04307483546892 0.710757815711555 -1.24407587218537 -1.32320070835975 -0.839107515449013 -0.670048112309837 -1.32294060164393 0.159712407705318 -0.725301066098036 -0.321155490638584 -0.847718282244769 -3.14838087347091 -2.34810026295619 -3.00404447012379 -1.44735250040161 -2.53386124463939 -0.535916562446771 -1.0133414919281 -1.12387893672606 0.356568749507379 1.02431056186254 0.734743530672596 0.253514210314845 0.292313347254113 0.104129540415478 1.11758925139602 -1.56896951170661 -1.42076444292675 -1.7920816179469 -0.635662819205399 0.145432955502615 -0.753620460863505 -0.479748298528651 0.00881693509842692 0.846584827660574 1.04612911529238 0.329853747899695 0.436356248850987 0.0891835438695908 -0.302820368641906 -0.209869837874298 0.437259667515399 -0.443682759499076 -0.789058754754464 -0.695181626135215 -0.324055098024752 -0.751492051753246
56991 -0.722038333811023 0.284083497899727 -0.109782204940595 -0.19465883339771 NA -0.147929004247163 -0.26867316075228 0.0342410358413555 0.760956636031143 0.0253814417024049 0.0728932802387362 0.419342511540993 1.49594055497063 1.16702931464957 0.553075653209997 0.20778989928659 -0.46492890648475 0.0238460330303155 -0.71517190993584 -0.202831785149143 -0.569775384378854 -0.254663748706943 -0.519211801897997 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.25704857033493 -2.88725400598378 -2.75064473329882 0.597393266321015 -0.24342608658249 0.190191704038607 0.324191644076541 0.562339162854831 1.09151339736943 0.391901824160446 0.323187304653822 0.694558714813535 1.21045187622723 -0.218324795904695 -0.268758462587083 1.35572012383145 0.686497511726615 -0.668654912398785 -0.553383192989094 0.319057855443272 -0.967583729168094
9724 -0.916209298289125 -1.27499201589597 -1.16323526324336 -0.658152796709441 -0.378325499158468 -0.683406920036137 0.957748249599565 0.846339829682486 0.0203877610325231 0.203404683058367 0.721305794260177 0.260368696410445 0.585450221853738 0.369893216782807 0.0316011723441352 0.155886292385032 -0.367323990260976 0.568140987670165 -0.79303013468357 -0.754559686815903 -0.441124085830851 -0.429170467456215 -0.499455305169926 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.33153556264225 -3.24638726834774 -3.41857724646225 0.779660848553309 -0.424980625177736 0.685091099176494 0.567362268601471 0.789296507400417 0.749428226224681 1.74072945339707 1.60625268840767 1.63891804930485 0.861036804979377 -0.647696193622924 -0.783187225320959 0.798109496167979 -0.0625408815881098 -0.753859354954234 -0.763976035657109 0.515324490411857 -0.89058040242269
[+] Show/hide bicluster #191 motif PSSM #1. bicluster 191 motif PSSM #1 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0 0.777778 0.111111 0.111111
2 0.111111 0.777778 0 0.111111
3 0 0 1 0
4 0.666667 0.222222 0 0.111111
5 0 0.888889 0 0.111111
6 0.777778 0.222222 0 0
7 0 0 1 0
8 0 0.111111 0 0.888889
9 0 1 0 0
10 1 0 0 0
11 0 0 1 0
12 0 0.444444 0.111111 0.444444
13 0.111111 0 0.888889 0
14 0.666667 0 0.111111 0.222222 [+] Show/hide bicluster #191 motif PSSM #2. bicluster 191 motif PSSM #2 Phaeodactylum tricornutum 21x4
POSITION A C G T
1 0.076923 0 0 0.923077
2 0.153846 0.846154 0 0
3 0.384615 0.076923 0.384615 0.153846
4 0 0.538462 0 0.461538
5 0.153846 0 0 0.846154
6 0 0.076923 0.923077 0
7 0.076923 0 0 0.923077
8 0.230769 0.769231 0 0
9 0.846154 0 0.076923 0.076923
10 0.307692 0.076923 0.076923 0.538462
11 0.076923 0.230769 0 0.692308
12 0.153846 0 0.692308 0.153846
13 0 0.076923 0 0.923077
14 0.153846 0.461538 0.230769 0.153846
15 0.692308 0.153846 0 0.153846
16 0.230769 0 0 0.769231
17 0.384615 0.076923 0 0.538462
18 0 0.461538 0.076923 0.461538
19 0.307692 0.076923 0 0.615385
20 0 0 0.230769 0.769231
21 0.384615 0 0.153846 0.461538 |