[+] Show/hide bicluster #209 rows and columns.
bicluster 209
Phaeodactylum tricornutum
21x79
[+] Show/hide bicluster #209 rows (genes).
bicluster 209 genes
Phaeodactylum tricornutum
21
[+] Show/hide bicluster #209 rows (short gene names).
bicluster 209 short names
Phaeodactylum tricornutum
21
short_name
[+] Show/hide bicluster #209 rows (long gene names).
bicluster 209 long names
Phaeodactylum tricornutum
21
long_name
[+] Show/hide bicluster #209 rows (NCBI RefSeq gene IDs).
bicluster 209 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #209 gene upstream sequences.
bicluster 209 upstream sequences
Phaeodactylum tricornutum
19
upstream
[+] Show/hide bicluster #209 columns (arrays; conditions).
bicluster 209 arrays
Phaeodactylum tricornutum
79
[+] Show/hide bicluster #209 ratios.
bicluster 209 ratios
Phaeodactylum tricornutum
21x79
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_2 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_1.2mg_1 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_3 GSE34988_Cadmium_4 GSE34988_Cadmium_5 GSE34988_Dispersed_oil_1 GSE34988_Dispersed_oil_4 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Salinity_15ppt_3 GSE34988_Salinity_15ppt_4 GSE34988_Simazine_1 GSE34988_Simazine_2 GSE34988_Simazine_3 GSE34988_Simazine_4 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_3 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_24h_3 GSE42039_light_6h_2 GSE42514_dark_8hr_light_3hr_1 GSE42514_light_0.5hr_1 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_6hr_1 GSE42514_light_6hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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34538 0.461785221067954 0.523352672426137 -0.108739828184538 -0.303446893104791 0.476920552860174 2.71520268167643 2.00117159923944 1.46653780881829 2.15390761950672 2.1155767504153 2.16337874577399 1.46512432274752 0.797048212128465 1.18535156253405 1.36651122284503 1.27910339908972 1.9903357278004 1.43324777480683 1.48483103780309 0.330864601065252 0.0840689069855036 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.75480627961731 -2.78161934457256 -2.6887163998862 -0.642305462905832 -0.488860665165073 0.477354291386797 0.508945699186382 0.462229807172035 -0.246882211904629 -0.694982248793683 0.587344518886831 0.891492051349222 -1.73965794878326 -1.02083959082124 -1.5993769932697 -0.362676511295775 -0.792701398406781 -0.548661048480907 -0.771387642174616 0.0522042757149358 -0.508741890715458 -0.322878799652218 -0.839209263975452 -0.633669282650684 -0.623730458629431 -0.573012451836303 -0.317620753826986 -0.420310411104343 -0.227818963926172 -0.582328448505971 -0.555166601661733 -0.447942900558954
36153 -0.0848661488671754 0.223242279148594 -0.380704772227449 -0.451596976903644 0.241987814038934 2.47018093119779 2.37859365600267 1.06337625358478 1.4855291075943 1.58183344102366 1.77443529132423 1.17523256441497 0.634492048410084 1.57812864167352 1.35035335136053 0.514680814228244 1.44865834460454 1.28174128538282 1.61934496047877 0.35293752263625 0.314243330343517 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.21871411402158 -3.4480004583862 -3.3080234037371 -1.11202464003416 -0.232253184445179 0.765032638013573 0.642033412331271 0.198045944044358 0.0824413009791311 -0.205158944580177 -0.13749822372247 0.388912726550338 -1.52898876343964 -0.751488473326244 -0.881701398570667 0.109315829797981 -1.21846779869937 -0.440157514875837 -1.10217023004105 0.241939590704697 -0.143635033819388 -0.302424609229482 -0.582218681091541 -0.899131674788401 -0.691059116684391 0.532798743051614 -0.0903944617038701 -0.438071806258923 -0.268358234714366 -0.279069384845711 -0.386152795256099 -0.700036136289531
42289 -0.0295889829330544 -0.270016195937805 -0.303216988095088 -0.303885460420402 0.0858339052379011 2.01119017901932 1.35444508653201 1.50118590314394 1.83066031460383 2.20055724757547 1.736947179318 1.36031427354827 0.650454598332552 1.16168663504543 1.23908904559358 1.10028299548313 2.00557946796885 1.20406555222927 1.22102915160467 0.0692981281507068 -0.786333078805237 2.41142599827822 2.54842873287909 2.48182248462092 1.8741476058818 2.08139385807492 -0.337606600162987 -0.338502386502525 -0.0447687692932643 -0.00152894108520944 -0.367241014476279 0.162407434799006 0.328025965583848 2.40604980960188 2.69272193807188 2.38608967161621 2.50910874505588 2.53353583794341 0.245095032657617 0.354000048267827 -0.142502412439646 0.0596895049040835 -0.233756015216534 -0.466077633617068 -0.389326315113769 -0.254326379305574 -0.372230714736534 -3.04784577592355 -3.33845222221703 -3.26189299402763 -0.260103047034754 -0.25310619769884 1.08633619468765 0.914879454904064 0.261660509257877 -0.246946741287239 -1.34721917911153 0.177296858256489 0.443279568062431 -1.60372136082618 -1.2443491178636 -1.85351366461169 -0.936823683934207 -0.498256990526739 -0.484232605116863 -0.485528698871091 0.601569217952448 -0.256632051335339 -0.0998540290881181 -0.313379237458868 -0.409899397306569 -0.158748814867927 -0.383250701464703 -0.0669854318810176 -0.398702220948879 -0.143770617430244 -0.159395547433042 0.108562300889212 -0.0419748809494598
43428 0.181810407641059 0.601487908918898 0.0197615227545878 -0.23155980171006 0.477767951894795 2.300439469352 1.36445675447899 0.955026176700557 2.00694176894968 2.0167423302512 1.93372866496953 1.35111925793549 0.680969490721597 1.39347029734189 2.09969777437662 0.947200282948404 1.68489629493443 1.04132933731015 1.45082783977087 0.276793372294426 0.250753960163118 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.77538034199312 -2.93962142557834 -3.02286754126103 -0.147007272341142 -0.38808286030472 0.562599804139169 0.777404653843912 0.340128131983654 -0.34116976921677 0.380542015674795 0.763788151484965 0.832376604987175 -1.96260615723344 -1.29807089637977 -0.476190441401447 0.362148940886224 -0.102353573619003 -0.619413946787538 -0.521819774207339 0.31800216253936 -0.129321102671173 -0.642122741686443 -0.243732999243669 -0.250982901123127 -0.415471354698966 -0.403707440846116 -0.238836886192969 -0.918617772933212 -0.168067590792467 -0.568114118906257 -0.483009227353948 -1.11295666269422
43431 -0.0078812741923401 0.180312561279227 -0.279431436293373 -0.285268714068545 0.286317525676363 2.26076972839519 1.88381467405231 1.20276313164514 1.46532622088352 1.83035921909839 1.63680209280699 1.23534214636394 0.528529529679377 1.32829495765579 1.1003515954464 0.717998226617042 1.30453957202194 0.946431920159539 1.1598311210643 0.0200325881285356 0.00503545406856198 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.16959953237487 -3.1134403094077 -3.51678436572253 -1.26018583389891 -1.0311343528983 0.466628733787606 0.451147941906271 0.524252690123955 -0.386137552968524 0.106123153901967 0.735922174620408 0.838641626765527 -1.58044882890487 -1.02509710384895 -0.507534494101273 -0.112616577768415 -0.991403464753728 -0.63890974419641 -1.08135660143504 0.16649169052478 -0.618514245244088 -0.520798323382503 -1.43086547732331 -1.20314510116485 -0.734037064622704 -0.486180337555943 -0.310500586465269 -0.537728810611309 0.136514475685091 -0.291207049081798 -0.368178346307816 -0.568286823013488
46897 0.470241505488016 0.269874222159812 -0.384807173820738 -0.461031660011185 0.410191976579361 2.57811341357936 2.29149519241566 1.0923485593727 1.9191678944854 2.10560449585466 2.15479051907893 1.23145521386577 0.937347987480599 1.32436619036205 1.59711034191729 1.08698453916412 1.83246203597635 1.5768127923983 1.55255440021493 0.148064662609953 -0.140314607027804 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.23176781345093 -3.29407873072592 -3.22781223407656 -0.750659794472454 -0.678260142615365 0.354666525955583 0.479941846723097 0.393983284031518 -0.18289887823368 0.223402379099592 0.766870191758818 0.738262550133654 -1.30062669698846 -0.930197150890644 -0.237043880939127 -0.121252193624574 -0.632735436180252 -0.599437716920155 -1.04649558303196 0.218006199240065 -0.0520870996922174 -0.2520796519362 -0.720173303984389 -0.416698840247682 -0.192337618589392 -0.323889980858403 -0.302983800039413 -0.31110848598455 -0.0747870296459913 -0.178522680615745 -0.1354206852861 -0.155195951721508
48010 0.104676633194029 -0.0615627516190754 -0.446215112786628 -0.336752871709691 0.184983043703744 2.55481498772945 1.96030202717383 0.896722903371567 1.46414651678964 1.51761421800353 1.60422749502015 1.01749453767379 0.765992251154542 1.52071394314804 1.0272694135008 0.618704156210131 1.11548370366962 1.18685410786339 1.40868905801599 0.0844005433048246 0.313376114417398 2.62413384940743 2.94161005163535 3.22546109022298 2.63863933546984 2.79676102094491 -0.985179561591739 -0.52196905535621 -0.300670173511522 -0.524725058833627 -1.15233454178582 0.385414018163732 0.827656735447611 2.51514833173556 2.60805568761411 2.60419433033425 2.04115319630449 2.32715634439263 0.583089188804067 0.339559917092428 -0.431932883830993 -0.00778226682536355 -0.24313884516445 -0.70369393042296 -0.661184279330848 -0.297910037067245 -0.843184160375602 -2.45577276045346 -2.55296894183143 -2.53711114334496 -0.711054215495711 -0.615280132129975 0.0839508286201771 0.0567823042023892 0.199533012528512 -0.423795596966665 0.105999028906892 0.905157712846192 0.659280192406619 -1.52522038440236 -0.994155036623426 -0.676807092570943 -0.14672319733829 -0.768611477839724 -0.870475396691954 -0.648885659696706 0 -0.326657326641949 -0.270029923978079 -0.774136200056954 -0.666332160952674 -0.384146562164666 -0.781814255427716 -0.494095371567001 -0.47955381383286 -0.259934264362669 -0.690636030768601 -0.632400472585985 -0.81815694230826
5236 0.32028086375581 0.492863521212413 -0.213741350435562 -0.6122710396939 0.10114630527473 2.53724891766708 1.41319081975895 1.81998252527228 1.29170928162206 1.79856865080102 1.68935713405611 1.85831025711577 0.496807186323592 1.469881951909 0.808875235020613 0.606472867956542 1.21008071241101 1.80844200623172 1.44789280191289 0.619662573246811 -0.567202743970364 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.15186276998656 -2.90410582752687 -2.86526137139222 -0.643831262466384 -0.551020332076182 0.921703664728212 0.760269412488703 0.84851691546615 -0.101195568945427 -0.404809577645699 0.579437095181084 0.195711507503129 -1.50326126957399 -1.33032124782449 -0.92010326054686 -0.835172539324661 -0.986318235384 -1.19147484525558 -1.44183534194592 0.508485948696929 -0.189334762675978 -0.317468833309714 -0.714029403867371 -0.458381716030607 -0.405512504810516 0.111602214369724 -0.190378075691011 -0.127709504411037 0.0314948889412331 -0.104100792985928 0.0961435342777735 0.106576038658088
52376 -0.221439505094816 0.36443079320405 -0.268915201681103 -0.476495109095615 0.495746549719313 2.0264084631154 1.70849806719797 1.10167280452288 1.87886005885244 1.96718505692701 1.58567237940202 1.35047575827114 1.00537289954301 1.29738378779082 1.45285154229285 1.01397913220078 1.90055241170756 1.1126124171618 1.44762416506234 0.443275803779426 -0.307835171669819 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -3.64254426915076 -3.78203201164301 -3.67301910024628 -0.541489280733576 -0.291849225925865 0.368393415899706 0.240714302036254 0.283060583908995 -0.456237841638072 -0.133213791649222 0.618365000091749 0.974498704737341 -0.329317662718746 0.2049477012446 0.101380857848445 0.404992847799912 -0.618657542817879 -0.300574769132588 -0.48032795754361 -0.163256793713963 -0.466678801803616 -0.351293962384784 -0.497524494995459 -0.778131454967305 -0.364524216719552 -0.224741164064772 -0.444190512649091 -0.641006651462755 -0.0127509365411525 -0.172437662735014 -0.277600107119978 -0.347471689657703
[+] Show/hide bicluster #209 motif PSSM #1. bicluster 209 motif PSSM #1 Phaeodactylum tricornutum 10x4
POSITION A C G T
1 0 0.705882 0 0.294118
2 0 0.117647 0.882353 0
3 0.058824 0.176471 0.294118 0.470588
4 0 0 0.176471 0.823529
5 0 1 0 0
6 0 0.117647 0.764706 0.117647
7 0 0.235294 0 0.764706
8 0.058824 0 0.117647 0.823529
9 0 0 1 0
10 0 0 0 1 [+] Show/hide bicluster #209 motif PSSM #2. bicluster 209 motif PSSM #2 Phaeodactylum tricornutum 14x4
POSITION A C G T
1 0.153846 0 0.692308 0.153846
2 0 0.692308 0.230769 0.076923
3 0 1 0 0
4 0.461538 0.538462 0 0
5 0.846154 0 0.153846 0
6 1 0 0 0
7 0.769231 0.153846 0 0.076923
8 0 0.615385 0.230769 0.153846
9 0.615385 0.076923 0.307692 0
10 0.923077 0.076923 0 0
11 0 0.461538 0.461538 0.076923
12 0.692308 0 0.307692 0
13 0.307692 0.615385 0.076923 0
14 0 0 1 0 |