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[+] Show/hide bicluster #224 rows and columns.
bicluster 224
Phaeodactylum tricornutum
18x77
[+] Show/hide bicluster #224 rows (genes).
bicluster 224 genes
Phaeodactylum tricornutum
18
[+] Show/hide bicluster #224 rows (short gene names).
bicluster 224 short names
Phaeodactylum tricornutum
18
short_name
[+] Show/hide bicluster #224 rows (long gene names).
bicluster 224 long names
Phaeodactylum tricornutum
18
long_name
[+] Show/hide bicluster #224 rows (NCBI RefSeq gene IDs).
bicluster 224 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #224 gene upstream sequences.
bicluster 224 upstream sequences
Phaeodactylum tricornutum
18
upstream
[+] Show/hide bicluster #224 columns (arrays; conditions).
bicluster 224 arrays
Phaeodactylum tricornutum
77
[+] Show/hide bicluster #224 ratios.
bicluster 224 ratios
Phaeodactylum tricornutum
18x77
GENES GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_30min_2 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_2 GSE17237_highlight_3hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_2 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Ammonia_5 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_6 GSE34988_Copper_2 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_3 GSE34988_Mixture_1 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Mixture_4 GSE34988_Mixture_5 GSE34988_Salinity_15ppt_1 GSE34988_Salinity_15ppt_5 GSE34988_Silver_1 GSE34988_Silver_3 GSE34988_Simazine_1 GSE34988_Simazine_3 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_1 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_6h_3 GSE42514_light_0.5hr_2 GSE42514_light_10.5hr_1 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_1 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_30min_1 GSE42514_light_16hr_dark_30min_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_24h_rep3 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep3
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45803 0.0247622941137401 -0.061913392622096 0.756284695884964 0.713650455150549 0.685222869329118 -0.13122539001984 -0.357934316246093 -0.123708058694939 0.852845489764532 0.231696927196683 0.540072195322421 -0.260875901953265 0.238569799297854 -0.0631064579571657 0.0612456202317959 -0.29222802741656 -0.139315800591159 -0.176694435567498 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.25727233492249 -2.2541588178333 -2.41851888406662 -2.95120729033274 -2.98915787996883 -2.73553360133141 0.209363128692387 0.342712949245652 -0.127299149804709 0.2406349284967 0.77016639383353 0.622445352900945 0.757971190918728 0.711215149710698 0.330812561863557 0.262164646106506 0.104849860230428 0.0437909250643847 -3.12229833436461 -3.10741004764364 -3.29791319669865 0 -1.86754737446851 -1.59673906660617 -1.22694761621673 -0.180910180420004 -0.176357924258919 -0.112490168083903 0.0176999348849384 -1.12316504658846 -1.23807793408402 -1.41336786335996 0.217403468126202 0.0432588488113822
48342 0.184668044152497 0.13151511519384 0.24189456521573 0.742446745553135 0.215759484417413 -0.552267908602824 -0.91090341762565 -0.566327325530482 0.691118165831436 0.917205001143017 0.302577400832139 -0.299530678419515 0.319285257262952 0.179497039197186 0.130084603326054 0.426722057800042 0.332417521109731 0.331212373263382 -2.23681822284087 -2.11719181218521 -2.19146637941796 -2.58134129942416 -3.16383625020766 0.174227162510906 0.0563730612416413 -0.0677532945187159 0.0925699717037716 0.0333169614193858 0.159850312114028 -0.453370796835739 -0.230286140090718 -0.572622174276311 -1.8231983723842 -1.50893709414934 -2.90360759015075 -1.6397557142282 -2.50679077119882 0.374187244499597 0.316118439147947 0.320918915420255 0.0802664895425143 0.0738424309459178 0.0841808350321966 -2.57225272205178 -2.48988609955191 -2.59034441214131 -2.85179380001222 -2.95865415107723 -2.8689504295464 0.0684778609317066 -0.761566973763478 0.423729815793405 -0.0191318697269796 1.02211410088525 0.591150305646948 0.998178827610852 0.818791644128234 0.388760038452172 0.155666078319818 0.165747501380423 -0.0662985704559929 -3.16132530224562 -3.05567848135694 -2.73301435992967 -0.264978768715752 -2.00758304509003 -1.91753794524346 -1.84352268103213 -0.301339890323476 -0.355092787371019 -0.356834122322805 0.0694524662243557 -1.33396560850193 -1.22066565241812 -1.39995305742161 -0.0169022124769167 -0.0990257465678415
50964 0.159189778679072 0.297143643274086 0.274448007485874 0.487945519586234 -0.082902565717685 -1.12464337370827 -1.16947003571791 -1.21028046021796 0.0590230351402657 0.140691166714931 0.358488611772224 -0.350051893302678 0.139675982025875 0.172420555571784 0.0225041996134002 0.242974500797221 0.182374928180363 0.199104615590424 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -2.53527038731615 -2.52549393737743 -2.55222775872335 -2.84746617177127 -2.89948742689271 -2.88504345367705 0.314826073149402 -1.37298050543276 0.356525302673138 0.302259528883262 1.0388851037218 0.723817832139614 1.061055801149 0.933351253580018 0.642503913721954 0.485195030871558 0.0636192211506719 -0.0723238266226397 -3.03297246999461 -2.73382078994089 -3.05037199377812 -0.306168024178089 -1.93976699051574 -1.79473668511395 -1.85265486393494 -0.369909438693665 -0.563273687780536 -0.382314754677733 0.22074647557588 -0.559219291193142 -0.633688226091085 -0.817718969980427 0.103643832061632 0.225769111554562
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8301 0.219746699304505 0.291132612784662 -0.0414919605758741 0.617236978944819 -0.080009508090075 -1.24016867366253 -0.991760383211144 -0.9405152854849 0.843042667819399 0.695426586894937 0.281304564490511 -0.0223896189131283 0.0223896189131283 0.155846024818069 0.0918719080338147 0.0663316145442474 0.0807762456793063 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.65660188364036 -1.82456999771732 -1.70839959889878 -2.9581289798225 -2.82416750232393 -2.85635803350561 0.37029555524298 -0.865030442694622 1.1277205790642 0.80698464998086 1.25962451647902 0.908984894416734 1.2375070655084 1.3580378521181 0.705803584960853 0.704188522099977 -0.144807319644991 0.197112924151748 -2.8498543975031 -2.18360564585777 -2.84338385902806 -0.372009760566474 -1.82456999771732 -1.77347775498486 -1.9302085000696 -0.311560142778117 -0.178656450753415 -0.364638968525672 0.435100452209982 -0.475938594772858 -0.795760877541043 -0.81394342737131 0.652878867710147 0.612631532973531
[+] Show/hide bicluster #224 motif PSSM #1. bicluster 224 motif PSSM #1 Phaeodactylum tricornutum 10x4
POSITION A C G T
1 0 0.357143 0 0.642857
2 0.285714 0.714286 0 0
3 1 0 0 0
4 0 1 0 0
5 0.5 0 0 0.5
6 0 0 1 0
7 0 0 0 1
8 0.214286 0.785714 0 0
9 1 0 0 0
10 0.642857 0.142857 0.214286 0 [+] Show/hide bicluster #224 motif PSSM #2. bicluster 224 motif PSSM #2 Phaeodactylum tricornutum 20x4
POSITION A C G T
1 0.2 0 0.8 0
2 0 1 0 0
3 0.4 0 0.6 0
4 0.8 0 0 0.2
5 0 1 0 0
6 0 0 0.8 0.2
7 0.4 0.2 0.2 0.2
8 0 0.8 0 0.2
9 0 0 0.8 0.2
10 0 0 0 1
11 0 0.8 0.2 0
12 0.2 0.8 0 0
13 1 0 0 0
14 0.2 0.8 0 0
15 0 0 0.4 0.6
16 0 1 0 0
17 0 1 0 0
18 0.8 0 0 0.2
19 0 0 0 1
20 0 0 0 1 |